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Representation Of Atypical Resources In The Discovery Layer: Metadata And Cataloging Aspects, Brian Falato Nov 2019

Representation Of Atypical Resources In The Discovery Layer: Metadata And Cataloging Aspects, Brian Falato

Tampa Library Faculty and Staff Publications

No abstract provided.


Usft Digital Scholarship Services Annual Report: Fy 2018-2019, Digital Scholarship Services Nov 2019

Usft Digital Scholarship Services Annual Report: Fy 2018-2019, Digital Scholarship Services

Scholar Commons Publications

This is the annual report for FY 2018-2019, the third full year of DSS.


Vitamin D Status And Risk Of Incident Tuberculosis Disease: A Nested Case-Control Study, Systematic Review, And Individual-Participant Data Meta-Analysis, Omowunmi Aibana, Chuan-Chin Huang, Said Aboud, Alberto Arnedo-Pena, Mercedes C. Becerra, Juan B. Bellido-Blasco, Ramesh Bhosale, Roger Calderon, Silvia Chiang, Jerome Galea Sep 2019

Vitamin D Status And Risk Of Incident Tuberculosis Disease: A Nested Case-Control Study, Systematic Review, And Individual-Participant Data Meta-Analysis, Omowunmi Aibana, Chuan-Chin Huang, Said Aboud, Alberto Arnedo-Pena, Mercedes C. Becerra, Juan B. Bellido-Blasco, Ramesh Bhosale, Roger Calderon, Silvia Chiang, Jerome Galea

Social Work Faculty Publications

Background: Few studies have evaluated the association between preexisting vitamin D deficiency and incident tuberculosis (TB). We assessed the impact of baseline vitamins D levels on TB disease risk.

Methods and findings: We assessed the association between baseline vitamin D and incident TB in a prospective cohort of 6,751 HIV-negative household contacts of TB patients enrolled between September 1, 2009, and August 29, 2012, in Lima, Peru. We screened for TB disease at 2, 6, and 12 months after enrollment. We defined cases as household contacts who developed TB disease at least 15 days after enrollment of the index patient. …


Early Progression To Active Tuberculosis Is A Highly Heritable Trait Driven By 3q23 In Peruvians, Yang Luo, Sara Suliman, Samira Asagari, Tiffany Amariuta, Yuriy Baglaenko, Marta Martinez-Bonet, Kazuyoshi Ishigaki, Maria Gutierrez-Arcelus, Roger Calderon, Jerome Galea Aug 2019

Early Progression To Active Tuberculosis Is A Highly Heritable Trait Driven By 3q23 In Peruvians, Yang Luo, Sara Suliman, Samira Asagari, Tiffany Amariuta, Yuriy Baglaenko, Marta Martinez-Bonet, Kazuyoshi Ishigaki, Maria Gutierrez-Arcelus, Roger Calderon, Jerome Galea

Social Work Faculty Publications

Of the 1.8 billion people worldwide infected with Mycobacterium tuberculosis, 5–15% will develop active tuberculosis (TB). Approximately half will progress to active TB within the first 18 months after infection, presumably because they fail to mount an effective initial immune response. Here, in a genome-wide genetic study of early TB progression, we genotype 4002 active TB cases and their household contacts in Peru. We quantify genetic heritability hg2 of early TB progression to be 21.2% (standard error 0.08). This suggests TB progression has a strong genetic basis, and is comparable to traits with well-established genetic bases. We …


Charting A Course Of Collaboration Between An Academic Library And A Museum, Brian Falato Jun 2019

Charting A Course Of Collaboration Between An Academic Library And A Museum, Brian Falato

Tampa Library Faculty and Staff Publications

No abstract provided.


Whole Genome Sequencing Identifies Bacterial Factors Affecting Transmission Of Multidrug-Resistant Tuberculosis In A High-Prevalence Setting, Avika Dixit, Luca Freschi, Roger Vargas, Roger Calderon, James Sacchettini, Francis Drobniewski, Jerome Galea, Carmen Contreras, Rosa Yataco, Zibiao Zhang Apr 2019

Whole Genome Sequencing Identifies Bacterial Factors Affecting Transmission Of Multidrug-Resistant Tuberculosis In A High-Prevalence Setting, Avika Dixit, Luca Freschi, Roger Vargas, Roger Calderon, James Sacchettini, Francis Drobniewski, Jerome Galea, Carmen Contreras, Rosa Yataco, Zibiao Zhang

Social Work Faculty Publications

Whole genome sequencing (WGS) can elucidate Mycobacterium tuberculosis (Mtb) transmission patterns but more data is needed to guide its use in high-burden settings. In a household-based TB transmissibility study in Peru, we identified a large MIRU-VNTR Mtb cluster (148 isolates) with a range of resistance phenotypes, and studied host and bacterial factors contributing to its spread. WGS was performed on 61 of the 148 isolates. We compared transmission link inference using epidemiological or genomic data and estimated the dates of emergence of the cluster and antimicrobial drug resistance (DR) acquisition events by generating a time-calibrated phylogeny. Using a set of …


From Journal Selection To Open Access: Practices Among Academic Librarian Scholars, Tina Neville, Camielle Crampsie Jan 2019

From Journal Selection To Open Access: Practices Among Academic Librarian Scholars, Tina Neville, Camielle Crampsie

USF St. Petersburg campus Faculty Publications

In this study, researchers surveyed academic librarians about their open access publishing practices. This analysis explores approaches to journal selection, awareness of open access options, and self-archiving practices. Fifty percent of the librarians in this study considered free open access when selecting a potential journal for publication, but a journal's fit to the topic and peer review were higher priorities. Findings indicate that, although many librarians publish in open access journals or take advantage of institutional repositories, there are still barriers to publishing in open access journals, including article processing charges, the tenure and promotion culture, and uncertainty around intellectual …


Delaying Latency To Hyperbaric Oxygen-Induced Cns Oxygen Toxicity Seizures By Combinations Of Exogenous Ketone Supplements, Csilla Ari, Andrew P. Koutnik, Janine Deblasi, Carol Landon, Christopher Q. Rogers, John Vallas, Sahil Bharwani, Michelle Puchowicz, Ilya Bederman, David M. Diamond, Mark S. Kindy, Jay B. Dean, Dominic P. D′Agostino Jan 2019

Delaying Latency To Hyperbaric Oxygen-Induced Cns Oxygen Toxicity Seizures By Combinations Of Exogenous Ketone Supplements, Csilla Ari, Andrew P. Koutnik, Janine Deblasi, Carol Landon, Christopher Q. Rogers, John Vallas, Sahil Bharwani, Michelle Puchowicz, Ilya Bederman, David M. Diamond, Mark S. Kindy, Jay B. Dean, Dominic P. D′Agostino

Psychology Faculty Publications

Central nervous system oxygen toxicity (CNS-OT) manifests as tonic-clonic seizures and is a limitation of hyperbaric oxygen therapy (HBOT), as well as of recreational and technical diving associated with elevated partial pressure of oxygen. A previous study showed that ketone ester (1,3-butanediol acetoacetate diester, KE) administration delayed latency to seizures (LS) in 3-month-old Sprague-Dawley (SD) rats. This study explores the effect of exogenous ketone supplements in additional dosages and formulations on CNS-OT seizures in 18 months old SD rats, an age group correlating to human middle age. Ketogenic agents were given orally 60 min prior to exposure to hyperbaric oxygen …


Celebrating Community In The Basic Course, Aubrey Huber Jan 2019

Celebrating Community In The Basic Course, Aubrey Huber

Communication Faculty Publications

This Basic Course Forum highlights authors’ responses to the following topics: What curricular programs present the best opportunity for curricular connections to the basic course? Building upon conversations from the July 2018 Basic Course Institute (hosted by University of Dayton), what administrative successes and challenges do basic course directors face?


Exploring Data Literacy Via A Librarian-Faculty Learning Community: A Case Study, Theresa G. Burress, Emily Z. Mann, Tina Neville Jan 2019

Exploring Data Literacy Via A Librarian-Faculty Learning Community: A Case Study, Theresa G. Burress, Emily Z. Mann, Tina Neville

USF St. Petersburg campus Faculty Publications

Faculty learning communities (FLCs) are year-long professional development opportunities available at many higher education institutions in the United States. While the literature reflects some librarian engagement with FLCs, it seems limited primarily to areas of traditional librarian expertise such as information literacy and outreach. This article describes a case study of a librarian-facilitated FLC focused on data literacy, which resulted in the development of a teaching toolkit, library-led data literacy instruction, and ongoing collaborations between librarians and faculty. The FLC structure proved to be a valuable framework that facilitated collaborative learning in topics relevant to both disciplinary faculty and librarians. …


Psychological Factors Related To Resilience And Vulnerability Among Youth With Hiv In An Integrated Care Setting., Tiffany Chenneville, Kemesha Gabbidon, Courtney Lynn, Carina Rodriguez Jan 2019

Psychological Factors Related To Resilience And Vulnerability Among Youth With Hiv In An Integrated Care Setting., Tiffany Chenneville, Kemesha Gabbidon, Courtney Lynn, Carina Rodriguez

USF St. Petersburg campus Faculty Publications

Approximately 22% of HIV diagnoses in 2015 occurred among youth aged 13–24. Much is known about the risk factors and psychopathology present in youth living with HIV (YLWH), however, relatively little is known about resiliency in this population. The current study sought to assess factors related to resilience and vulnerability among YLWH as well as the impact of psychosocial factors on these constructs using existing clinical data from an integrated care clinic serving YLWH in the southeastern United States. Data included findings from mental health screeners administered as part of the standard protocol of care for youth aged 13–24 including …


The Neverending Story: Turning Statistics Into Stories, Emily Z. Mann Jan 2019

The Neverending Story: Turning Statistics Into Stories, Emily Z. Mann

USF St. Petersburg campus Faculty Publications

No abstract provided.


Florida Newspaper History Chronology, 1783-2001, David Shedden Jan 2019

Florida Newspaper History Chronology, 1783-2001, David Shedden

USF St. Petersburg campus Faculty Publications

This resource guide about the history of Florida newspapers begins in 1783 during the last days of British rule and ends with the first generation of news websites.


Transmissibility And Potential For Disease Progression Of Drug Resistant Mycobacterium Tuberculosis: Prospective Cohort Study, Mercedes C. Becerra, Chuan-Chin Huang, Leonid Lecca, Jaime Bayona, Carmen Contreras, Roger Calderon, Rosa Yataco, Jerome Galea, Zibiao Zhang, Sidney Atwood, Ted Cohen, Carole D. Mitnick, Paul Farmer, Megan Murray Jan 2019

Transmissibility And Potential For Disease Progression Of Drug Resistant Mycobacterium Tuberculosis: Prospective Cohort Study, Mercedes C. Becerra, Chuan-Chin Huang, Leonid Lecca, Jaime Bayona, Carmen Contreras, Roger Calderon, Rosa Yataco, Jerome Galea, Zibiao Zhang, Sidney Atwood, Ted Cohen, Carole D. Mitnick, Paul Farmer, Megan Murray

Social Work Faculty Publications

Objective: To measure the association between phenotypic drug resistance and the risk of tuberculosis infection and disease among household contacts of patients with pulmonary tuberculosis.

Setting: 106 district health centers in Lima, Peru between September 2009 and September 2012.

Design: Prospective cohort study.

Participants: 10 160 household contacts of 3339 index patients with tuberculosis were classified on the basis of the drug resistance profile of the patient: 6189 were exposed to drug susceptible strains of Mycobacterium tuberculosis, 1659 to strains resistant to isoniazid or rifampicin, and 1541 to strains that were multidrug resistant (resistant to isoniazid and rifampicin).

Main outcome …


The Hiv Seers Project: A Qualitative Analysis Of Program Facilitators’ Experience, Tiffany Chenneville, Kemesha Gabbidon, Hunter Drake Jan 2019

The Hiv Seers Project: A Qualitative Analysis Of Program Facilitators’ Experience, Tiffany Chenneville, Kemesha Gabbidon, Hunter Drake

Psychology Faculty Publications

HIV-related stigma creates barriers to HIV testing, medication adherence, and retention in care. Guided by the principles of community-based participatory research (CBPR) and in collaboration with community health workers (CHWs), the Stigma-reduction through Education, Empowerment, and Research (SEERs) project was developed with and for youth living in Nakuru, Kenya to reduce HIV-related stigma. The purpose of this qualitative study was to examine the experiences of the CHWs serving as SEERs facilitators. To evaluate SEERs, 37 facilitators completed open-ended survey questions to gather their experiences and recommendations for future program implementation and sustainability. Participants’ mean age was 30.58 (standard deviation = …


Endure, Evolve, Achieve: Stakeholder Perspectives On The Effectiveness Of The Swamp Apes Program In Restoring Biopsychosocial Functioning Of American Veterans, Manisha Joshi, Joshua Zaris Goldman Jan 2019

Endure, Evolve, Achieve: Stakeholder Perspectives On The Effectiveness Of The Swamp Apes Program In Restoring Biopsychosocial Functioning Of American Veterans, Manisha Joshi, Joshua Zaris Goldman

Social Work Faculty Publications

A growing body of evidence highlights the benefits of recreational outdoor therapy for veterans experiencing posttraumatic stress disorder. We employed the Hawkins Model for “Nature as Strengths-based Recreational Therapy Intervention for Military Members” to assess the Swamp Apes/Volunteer Wilderness Alliance (SA/VWA) in South Florida, which has among its key objectives ridding the Everglades National Park of invasive species (e.g., Burmese python). Focus group and interviews with 10 veterans and seven non-veterans (i.e., family, health providers) were conducted to assess benefits, risks, and potential for developing SA/VWA activities into a formal therapy program for veterans rooted in the American Therapeutic Recreation …


Evaluating Psychosocial Mechanisms Underlying Stem Persistence In Undergraduates: Scalability And Longitudinal Analysis Of Three Cohorts From A Six-Day Pre–College Engagement Stem Academy Program, Sophie Kuchynka, Danielle Findley-Van Nostrand, Richard S. Pollenz Jan 2019

Evaluating Psychosocial Mechanisms Underlying Stem Persistence In Undergraduates: Scalability And Longitudinal Analysis Of Three Cohorts From A Six-Day Pre–College Engagement Stem Academy Program, Sophie Kuchynka, Danielle Findley-Van Nostrand, Richard S. Pollenz

Psychology Faculty Publications

In a previous report, we validated that a cohort of first-year undergraduates who participated in a weeklong pre–college engagement STEM Academy (SA) program were retained in science, technology, engineering, and mathematics (STEM) at a higher rate than a matched comparison group (MCG). In addition, SA students yielded increases in science identity and sense of belonging to STEM and to the university. Here, we report the ability to scale the size of the SA program to accommodate more students and replicate the previous findings with two additional cohorts. Longitudinal analysis of the 2015 and 2016 program cohorts demonstrate that both groups …


Understanding Health-Related Behavior Among Adolescents Living With Hiv In Lima, Peru, Carly A. Rodriguez, Emiliano Valle, Jerome Galea, Milagros Wong, Lenka Kolevic, Maribel Muñoz, Leonid Lecca, Molly F. Franke Jan 2019

Understanding Health-Related Behavior Among Adolescents Living With Hiv In Lima, Peru, Carly A. Rodriguez, Emiliano Valle, Jerome Galea, Milagros Wong, Lenka Kolevic, Maribel Muñoz, Leonid Lecca, Molly F. Franke

Social Work Faculty Publications

Background: The global HIV burden among adolescents ages 10–19 is growing. This population concurrently confronts the multifaceted challenges of adolescence and living with HIV. With the goal of informing future interventions tailored to this group, we assessed sexual activity, HIV diagnosis disclosure, combination antiretroviral therapy (cART) adherence, and drug use among adolescents living with HIV (ALHIV) in Lima, Peru.

Methods: Adolescents at risk or with a history of suboptimal cART adherence completed a self-administered, health behaviors survey and participated in support group sessions, which were audio recorded and used as a qualitative data source. Additionally, we conducted in-depth interviews with …


Copyright Educational Services And Information In Academic Libraries, Leetta Schmidt Jan 2019

Copyright Educational Services And Information In Academic Libraries, Leetta Schmidt

Tampa Library Faculty and Staff Publications

Library and information science literature tells a story of the recent surge in creation the copyright librarian positions in academic libraries from identification of need to construction of job responsibilities and position requirements. This article seeks to continue the story by identifying what information materials and services the librarians responsible for providing copyright assistance have created at their libraries, and how those services are delivered to their institutions. An examination of 115 library websites is employed to identify topics and foci within copyright services with the goal of establishing commonalities of service among U.S. research 1 libraries that can be …


Scholarly Publishing Literacy At The University Of South Florida Libraries: From Advising To Active Involvement, Chelsea Johnston, Jason Boczar Jan 2019

Scholarly Publishing Literacy At The University Of South Florida Libraries: From Advising To Active Involvement, Chelsea Johnston, Jason Boczar

Tampa Library Faculty and Staff Publications

INTRODUCTION Successful open access (OA) publishing in libraries requires careful guidance and organization. Support and services offered vary depending on available resources as well as the robustness of a library’s publishing program. DESCRIPTION OF PROGRAM This article describes the connection between publishing services and scholarly publishing literacy through examples from the University of South Florida (USF) Libraries. The USF Libraries’ OA publishing program includes journals, textbooks, conference proceedings, and more. Our program balances advocating for open access with advising for actions that serve our partners’ goals. This invites trust, sustainable relationships, and opportunities for new work. NEXT STEPS At the …


Balancing Informed Evaluation With Efficiency: Applying Copyright And Licensing Evaluation To Reserves And Interlibrary Loan, Leetta Schmidt Jan 2019

Balancing Informed Evaluation With Efficiency: Applying Copyright And Licensing Evaluation To Reserves And Interlibrary Loan, Leetta Schmidt

Tampa Library Faculty and Staff Publications

This article examines steps taken at one academic library to address issues encountered when attempting to create a foundation of copyright knowledge to assist staff in reserves and interlibrary loan. It reviews the development of a copyright policy for the library that specifically addressed interlibrary loan and reserves activities. It also addresses how conducting staff instruction, developing process documentation, and having regular training meetings, enhanced each department’s ability to incorporate the new policy into daily workflows. Finally, it points out new issues encountered when attempting to simplify how copyright and licensed materials are handled.