Digital Commons Network^™

Antibacterial Activity And Chemical Characterization Of Resin From Sciadopitys Verticillata (Thunb.) Siebold And Zuccarini, David Ira Yates

Doctoral Dissertations

Sciadopitys verticillata produces white viscous resin that is unique among the conifers. This research investigated effects of resin on bacteria from different ecological niches and the chemical composition of the resin. Each bacterial species was evaluated separately for response to winter- and summer-collected resins. Exposure to winter-collected resin reduced numbers of colonies of Bacillus cereus, Erwinia amylovora, Agrobacterium tumefaciens, and Escherichia coli and increased numbers of Xanthomonascampestris, Pseudomonas fluorescens, and Pseudomonas syringae. Summer-collected resin affectedpopulation growth of two bacterial species; population counts of E. amylovora decreased and those of P. fluorescens increased. Selected strains of …

Utilizing Cover Crops To Improve Sustainability Of Conventional Weed Management Programs, Garret Brown Montgomery

Doctoral Dissertations

Research was conducted from the fall of 2014 to the fall of 2016 to evaluate the optimal utilization of cover crops for weed control in no-till environments. Studies included a corn (Zea mays L.) termination timing study to evaluation different termination intervals of cereal rye (Cereal rye L.), hairy vetch (Vicia villosa Roth.), and a combination of cereal rye and hairy vetch cover crops on corn growth and development, an evaluation of a roller crimper for cover crop termination prior to corn study, an evaluation of a roller crimper for cover crop termination prior to soybeans [ …

Improved Fungicidal Control Of Large Patch Through Optimal Use Of Surfactants And Spray Rate Volume, Jesse J. Benelli

Doctoral Dissertations

Large patch (Rhizoctonia solani AG 2-2LP) epidemics cause significant damage to Japanese lawngrass (JLG; Zoysia japonica) in the transition zone. Large patch primarily affects the stems and sheaths of JLG and is difficult to control using traditional fungicide sprays. Field and growth chamber experiments were conducted during 2015-2016 in TN and GA to evaluate methods to enhance fungicidal control of large patch in JLG landscapes. The 1^st experiment evaluated the most critical application target site that resulted in the greatest amount large patch control. In this experiment, four fungicides (azoxystrobin, flutolanil, tebuconazole, and chlorothalonil) were dispensed as …

Switchgrass Extractives Have Potential As A Value-Added Antimicrobial Against Plant Pathogens And Foodborne Pathogens, Alexander Ian Bruce

Masters Theses

Panicum virgatum (switchgrass), a perennial grass native to North America, is a leading biomass feedstock candidate for the manufacture of cellulosic ethanol. Switchgrass is considered a viable option for biofuel production due to its cheap production cost and ability to grow on marginal land. Biofuel derived from switchgrass has been shown to be very energy efficient, producing 540% more renewable energy versus nonrenewable energy expended. Switchgrass-derived biofuel is also estimated to have greenhouse gas emissions that are 94% lower than emissions from gasoline (Schmer et al 2008). Biofuels are created through biochemical processes that utilize various enzymes and microorganisms for …

Comparison Of Mesophyll Protoplast Isolation And Transformation Between Panicum Virgatum And Panicum Hallii, Andrea Grace Collins

Masters Theses

Protoplasts are appropriate targets for genome editing, DNA functional screens and transgenesis. This project focuses on the comparison of inexpensive mesophyll protoplast isolation via the use of food-grade enzymes and transformation between diploid Panicum hallii Vasey (PAH) and polyploid cellulosic feedstock Panicum virgatum L (switchgrass), a relative of PAH. PAH has great potential as a C4 model species for crop and bioenergy research. Here an inexpensive switchgrass and PAH mesophyll protoplast isolation and transformation system was developed; the first protoplast system for PAH. Using low-cost commercial food-grade enzymes, a cost reduction of ~1000-fold was achieved compared to traditional protoplast isolating …

Characterization Of Fusarium Species And Alternaria Alternata, And Their Effects On Switchgrass Health And Chemical Components, Sara Beth Collins

Masters Theses

Panicum virgatum L., readily referred to as Switchgrass, is a perennial warm-season bunch grass, used as an alternative energy source for biofuel production. There is insufficient research on switchgrass pathogens, and is expected that an increase in disease pressure will result as more land is reserved for this perennial crop. The purpose of this research was to identify and characterize pathogenic Alternaria alternata and Fusarium species on Switchgrass (Panicum virgatum L.), and to evaluate their impact on stand establishment and plant health. Molecular identifications of fungal isolates obtained from infected commercial switchgrass seed yielded eight species (A. alternata, …

Rapid Molecular Detection And Population Genetics Of Pityophthorus Juglandis, A Vector Of Thousand Cankers Disease In Juglans Spp., Emel Oren

Masters Theses

Thousand Cankers Disease (TCD) is a disease complex involving the fungal pathogen Geosmithia morbida, an insect vector Pityophthorus juglandis, and the hosts, Juglans spp. and Pterocarya spp. Signs and symptoms of TCD include crown thinning due to branch dieback, yellowing and wilting of the leaves, appearance of epicormic shoots, numerous entrance/exit holes, gallery formation by P. juglandis, and the development of small, dark brown cankers underneath the bark. TCD originally described from western U.S., has now expanded to eastern U.S. and northwestern Italy. The disease complex is often difficult to diagnose due to the absence of symptoms …

Computational Analyses Of Mrna Ribosome Loading In Arabidopsis Thaliana, Joseph Benjamin Ernest

Doctoral Dissertations

Translation of mRNA into protein is a critical step in gene expression, but the principles guiding its regulation at the genome level are not completely understood. Translation can be quantified at a genome scale by measuring the ribosome loading of mRNA—the extent to which mRNA is associated with ribosomes. In this dissertation, I present investigations into how genome-wide ribosome loading is controlled in Arabidopsis thaliana. In chapter 1, I give an overview of regulation of ribosome loading and translation. In chapter 2, I present research demonstrating for the first time that genome-wide ribosome loading in plants is partially controlled by …

Modification Of Carbohydrate Active Enzymes In Switchgrass (Panicum Virgatum L.) To Improve Saccharification And Biomass Yields For Biofuels, Jonathan Duran Willis

Doctoral Dissertations

The natural recalcitrance of plant cell walls is a major commercial hurdle for plant biomass to be converted into a viable energy source as alternative to fossil fuels. To circumvent this hurdle manipulation of carbohydrate enzymes active in the cellulose and hemicellulose portions of the plant cell wall can be utilized to improve feedstocks. Production of cellulolytic enzymes by plants have been evaluated for reducing the cost associated with lignocellulosic biofuels. Plants have successfully served as bioreactors producing bacterial and fungal glycosyl hydrolases, which have altered plant growth to improve saccharification. A bioprospecting opportunity lies with the utilization of insect …

Decoding The Cellular Zipcode: Functional Analysis Of Transit Peptide Motifs And Mechanistic Implications In Plastid Targeting And Import, Kristen N. Holbrook

Doctoral Dissertations

Eukaryotic organisms are defined by their compartmentalization and various organelles. The membranes that define these organelles require complex nanomachines (known as translocons) to selectively mediate the import of proteins from the cytosol where they are synthesized into the organelle. The plastid, (specifically the chloroplast) which is characteristic of plant cells, possibly represents the most complex system of protein sorting, requiring many different translocons located in the three membranes found in this organelle. Despite having a small genome, the vast majority of plastid-localized proteins are nuclear-encoded and must be post-translationally imported from the cytosol. These proteins are encoded as a larger …

Anaerobic Soil Disinfestation: Meta-Analysis And Optimization Of Amendment Carbon Rate And C:N Ratio To Control Key Plant Pathogens And Weeds, Utsala Shrestha

Doctoral Dissertations

Anaerobic soil disinfestation (ASD) is an environmentally friendly and cost effective pre-plant soil treatment technique that allows effective control of soilborne pests by creating anaerobic conditions, particularly for specialty and organic crop production under diverse environmental conditions. In spite of being a proven technique, ASD has to be optimized to fit into local production systems with specific pathogen pressure using locally available amendments for successful implementation on a commercial scale. Our meta-analysis study on soilborne pathogens, plant parasitic nematodes, and weeds validated that ASD is an effective approach to control various soilborne pathogens. This study aims to optimize the carbon …

Characterization Of An Ethylene Receptor In Synechocystis Sp. Pcc 6803, Randy Francis Lacey

Doctoral Dissertations

In plants, ethylene functions as a hormone regulating many growth and developmental processes. Ethylene receptors in plants resemble bacterial two-component signaling systems. Because of this it, ethylene receptors are thought to have been acquired by gene transfer from the cyanobacterial endosymbiont that lead to the development of the chloroplast. However, prior to this work, functional ethylene receptors were thought to only be found in green plants. Here, we show that the cyanobacterium Synechocystis sp. PCC 6803 (Synechocystis) contains a functional ethylene receptor, SynEtr1. SynEtr1 contains a predicted ethylene binding domain, a photosensory cyanobacteriochrome (CBCR) domain, and a histidine …

Nanocomposite Adhesive Of English Ivy (Hedera Helix): Bioproduction, Nanoparticle Isolation, And Molecular Analysis, Jason Neil Burris

Doctoral Dissertations

English ivy naturally produces organic nanoparticles from its adventitious root hairs, and possesses characteristics that may allow them to replace metal-based nanoparticles in common applications, such as sunscreen. At the onset of the research, it was hypothesized that a physical mechanism of attachment, similar to the gecko footpad, was used to generate the adhesive force for attachment; however, through the results obtained from recent work, it is clear that a biochemical mechanism is involved in the generation of the strength of adhesion. Therefore, the goal of this research was to provide a better understanding of the genetic basis of nanoparticle …

Testing The Temporal Stability Of The Climate Response Of Tree Species At Norris Dam State Park, Tennessee, U.S.A., Allison Elizabeth Ingram

Masters Theses

Temporal stability of the climate-tree growth relationship means that over time, tree species were responding to a specific climate variable and continue to respond to that variable into the present. The stability of this response is important to test prior to attempting to reconstruct past climate. In this study, I sampled oaks (white oak = Quercus alba L. and chestnut oak = Quercus montana Willd.) and pines (Virginia pine = Pinus virginiana Mill. and shortleaf pine = Pinus echinata Mill.) growing in Norris Dam State Park in eastern Tennessee and tested the temporal stability of these species and their potential …

Influence Of Application Technology On Foliar Fungicide Efficacy On Cercospora Sojina Infected Soybean, Shawn Alan Butler

Masters Theses

Due to the constant concern with off-target contamination and application technology requirements associated with future herbicide-tolerant crops, the use of drift-reduction nozzle technology (DRT) may increase. The primary objective of this research was to evaluate the effects of coarse droplets generated by drift-reduction nozzles on foliar fungicide efficacy and residual in soybean infected by frogeye leaf spot caused by Cercospora sojina. No differences in disease control, soybean yield, spray retention, and residual when applying Quadris Top SB, a premix of azoxystrobin and difenoconazole, using nozzles that produce either a medium or ultra coarse droplet spectrum were determined.

Due to …

Computational Identification Of Terpene Synthase Genes And Their Evolutionary Analysis, Qidong Jia

Doctoral Dissertations

Terpenoids, the largest and most structurally and functionally diverse class of natural compounds on earth, are mostly synthesized by plants to be involved in various plant environment interactions. Some terpenoids are classified as primary metabolites essential for plant growth and development. Terpene synthases (TPSs), the key enzymes for terpenoid biosynthesis, are the major determinant of the tremendous diversity of terpenoid carbon skeletons. The TPS genes represent a mid-size family of about 30-100 functional genes in almost all major sequenced plant genomes. TPSs are also found in fungi and bacteria, but microbial TPS genes share low levels of sequence similarity and …

An Evaluation Of Cover Crop Species And Mixtures For Tennessee Organic Production Systems, Bonnie J. Craighead

Chancellor’s Honors Program Projects

No abstract provided.

Contrasting Soil Management Practice, Nitrogen Source, And Harvest Method Effects On Corn Production In Ohio And Tennessee, Casey Theresa Sullivan

Masters Theses

Current global agricultural production is completed with little regards to sustainable soil use. It is clear that the research and use of sustainable management practices must be expanded in order to preserve this natural resource. The objectives of this research were to focus on improving soil fertility and resource use efficiency by 1) evaluating farm management practices to find those that conserve soil and improve yields, 2) looking at alternative methods of fertilizing through the reuse of waste materials in agriculture. The last objective was to 3) test a more efficient method data collection and research production, resulting in more …

Evaluation Of Fungicide Efficacy Against Cercospora Sojina And Selection For Qoi-Fungicide Resistance In Soybean, Alicia Mercedes Cochran

Masters Theses

Frogeye leaf spot (FLS) of soybean is caused by Cercospora sojina. In 2010, resistance to the quinone outside inhibitor (QoI) fungicides was reported. Since then, evaluating FLS for QoI-resistance has been of particular interest in Tennessee and other soybean-producing states. In order to determine alternative fungicide options, fungicides with solo and combination mode of action were tested in 2013-2014. The objectives were,1) to evaluate fungicide efficacy for disease control and yield protection, and 2) evaluate selection pressure for QoI-resistance. Treatments included the following fungicide groups: QoI, DMI, MBC, Chlorothalonil, QoI+DMI, SDHI+QoI, SDHI+QoI+DMI, and DMI+MBC. QoI and Chlorothalonil treatments failed …

Impacts Of Biofumigation And Anaerobic Soil Disinfestation On Strawberry Production, Jennifer Renee’ Wheeler

Masters Theses

Due to the phase-out of methyl bromide, there is a need for alternative, nonchemical fumigation treatments in strawberry production. Anaerobic soil disinfestation and biofumigation are two non-chemical methods for controlling soilborne plant pathogens of strawberry. This study was designed to observe strawberry fruit nutrition and soil volatiles of a strawberry field being treated with biofumigation treatments, anaerobic soil disinfestation treatments, and a combination of the two alternative methods. A trial was conducted with 11 pre-plant soil-incorporated treatments arranged in a randomized complete block design with 6 rows (blocks). Biofumigation treatments consisted of deactivated mustard meal, deoiled mustard meal, mustard pellets, …

Rooting Characteristics And Antioxidant Pigment Responses Of Three Hybrid Bermudagrass [Cynodon Dactylon (L.) Pers. × Cynodon Transvaalensis Burtt- Davy] Cultivars Exposed To Drought, Cory Alan Yurisic

Masters Theses

With recent changes in global climate, water use and its conservation have become important topics of discussion. Turfgrasses for lawns, parks, and other recreational areas are often perceived negatively due to the need for irrigation. The identification of turfgrasses possessing an improved ability to withstand water deficit is an important goal in science to curb irrigation requirements in the landscape. Newly released cultivars of hybrid bermudagrass (C. dactylon L. x. C. transvaalensis Burtt-Davy) have demonstrated improved tolerance to stresses such as cold, traffic, and water deficit; however, drought resistance mechanisms of these new cultivars have been largely uninvestigated. Drought …