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Impact Of Root Herbivory On Grassland Community Structure: From Landscape To Microscale, P. J. Murray, R. Cook, L. A. Dawson, A. C. Gange, S. J. Grayston, A. M. Treonis Nov 2022

Impact Of Root Herbivory On Grassland Community Structure: From Landscape To Microscale, P. J. Murray, R. Cook, L. A. Dawson, A. C. Gange, S. J. Grayston, A. M. Treonis

IGC Proceedings (1997-2023)

Root herbivores are an important functional group in grassland ecosystems. Whilst there is a plethora of information on their impact as pests in productive grassland, few studies of their impact on biodiversity in upland grassland have been made. Root herbivores act in a number of ways, they reduce host plant biomass, alter root architecture, change root exudation patterns and increase water stress in the plant. Root herbivores may change above ground plant diversity, both through direct removal of plant species and through reduction in competitive ability of some species, through their feeding. In addition, we postulate that root herbivores affect …


Soil Biology And The Emergence Of Adventive Grassland Ecosystems, T. R. Seastedt Nov 2022

Soil Biology And The Emergence Of Adventive Grassland Ecosystems, T. R. Seastedt

IGC Proceedings (1997-2023)

The last few years have seen an explosion of information on the responses and feedbacks of soil biota to species and environmental changes. Soil biologists, plant ecologists, and biogeochemists have been searching for patterns, generality and predictability in these relationships. A few brave souls have had the courage to assemble comprehensive assessments of soil biology in our rapidly changing world. Several years ago, I reviewed Wardle’s (2002) book emphasising the links between above- and belowground components of ecosystems. That activity – as well as the present one – provided me with the opportunity to survey recent findings in soil biology. …


Pando's Pulse: Vital Signs Signal Need For Course Correction At World-Renowned Aspen Forest, Paul C. Rogers Sep 2022

Pando's Pulse: Vital Signs Signal Need For Course Correction At World-Renowned Aspen Forest, Paul C. Rogers

Aspen Bibliography

Upland aspen (Populus spp.) forests contribute significantly to biodiversity in their circumboreal role as keystone species. As aspen ecosystems flourish or diminish, myriad dependent species follow suit. The 43-hectare Pando aspen (Populus tremuloides Michx.) clone in Utah, USA, is thought to be the largest living organism on earth, but is faltering due to chronic herbivory. Long-term resilience in aspen communities, including Pando, rests on successful recruitment of vegetative suckers that are nutritiously desirable to browsing ungulates. Here, I evaluate aspen reproduction alongside numerous vital indicators of Pando's status in the first trend assessment of this embattled iconic forest. …


18s-Nemabase: Curated 18s Rrna Database Of Nematode Sequences, Kaitlin Gattoni, Eli M. S. Gendron, Rebeca Sandoval- Ruiz, Abigail Borgemeier, J. Parr Mcqueen, Rachel M. Shepherd, Dieter Slos, Tom Powers, Dorota L. Porazinska Aug 2022

18s-Nemabase: Curated 18s Rrna Database Of Nematode Sequences, Kaitlin Gattoni, Eli M. S. Gendron, Rebeca Sandoval- Ruiz, Abigail Borgemeier, J. Parr Mcqueen, Rachel M. Shepherd, Dieter Slos, Tom Powers, Dorota L. Porazinska

Department of Plant Pathology: Faculty Publications

Nematodes are the most abundant and diverse animals on the planet but lack representation in biodiversity research. This presents a problem for studying nematode diversity, particularly when molecular tools (i.e., barcoding and metabarcoding) rely on well-populated and curated reference databases, which are absent for nematodes. To improve molecular identification and the assessment of nematode diversity, we created and curated an 18S rRNA database specific to nematodes (18S-NemaBase) using sequences sourced from the most recent publicly available 18S rRNA SILVA v138 database. As part of the curation process, taxonomic strings were standardized to contain a fixed number of taxonomic ranks relevant …


18s-Nemabase: Curated 18s Rrna Database Of Nematode Sequences, Kaitlin Gattoni, Eli M. S. Gendron, Rebeca Sandoval- Ruiz, Abigail Borgemeier, J. Parr Mcqueen, Rachel M. Shepherd, Dieter Slos, Tom Powers, Dorota L. Porazinska Aug 2022

18s-Nemabase: Curated 18s Rrna Database Of Nematode Sequences, Kaitlin Gattoni, Eli M. S. Gendron, Rebeca Sandoval- Ruiz, Abigail Borgemeier, J. Parr Mcqueen, Rachel M. Shepherd, Dieter Slos, Tom Powers, Dorota L. Porazinska

Department of Plant Pathology: Faculty Publications

Nematodes are the most abundant and diverse animals on the planet but lack representation in biodiversity research. This presents a problem for studying nematode diversity, particularly when molecular tools (i.e., barcoding and metabarcoding) rely on well-populated and curated reference databases, which are absent for nematodes. To improve molecular identification and the assessment of nematode diversity, we created and curated an 18S rRNA database specific to nematodes (18S-NemaBase) using sequences sourced from the most recent publicly available 18S rRNA SILVA v138 database. As part of the curation process, taxonomic strings were standardized to contain a fixed number of taxonomic ranks relevant …


Ruminant Livestock Production Systems And Imperatives For Sustainable Development, J. W. Smith Mar 2022

Ruminant Livestock Production Systems And Imperatives For Sustainable Development, J. W. Smith

IGC Proceedings (1997-2023)

No abstract provided.


Biodiversity Conservation And Sustainable Livelihoods In Rangelands: Trends, Challenges And Opportunities, J. Waithaka Mar 2022

Biodiversity Conservation And Sustainable Livelihoods In Rangelands: Trends, Challenges And Opportunities, J. Waithaka

IGC Proceedings (1997-2023)

Rangelands cover about 54% of the earth’s surface and are essential for agricultural and livestock production, environmental protection and the in-situ conservation of genetic resources. Despite providing services that support life on earth, rangelands have been neglected to a large extent when compared to other types of ecosystems. This paper provides an overview of the importance of rangelands in conserving biodiversity and supporting the livelihoods of millions of people globally. Rangelands have lost ecological integrity due to unsustainable anthropogenic land-use changes and impacts. It is estimated that over 80% of Key Biodiversity Areas (KBAs) are either not adequately protected or …


Uses Of Native Plant Species Of A Communal Rangeland Within ‘Sierra De Huautla’ Protected Area, México, E. Cortés-Díaz, T. González-Bonilla, L. López-Aguilar, Pedro A. Martínez-Hernández, A. Hernández-Tapia Mar 2022

Uses Of Native Plant Species Of A Communal Rangeland Within ‘Sierra De Huautla’ Protected Area, México, E. Cortés-Díaz, T. González-Bonilla, L. López-Aguilar, Pedro A. Martínez-Hernández, A. Hernández-Tapia

IGC Proceedings (1997-2023)

Sustainability of communal rangelands has become a major concern at national and international levels because land use conflicts and associated social conflicts allows for over-utilization of selected species making a high pressure on them and given away their places to species with no use at all becoming lands degraded and unproductive. The objective of the study was to determine floristic composition and native plant uses by local peasants. The range surface is of 4262 ha, belongs to the communal land ‘El Limon’, in Tepalcingo, Morelos, Mexico, and it is within the Natural Reserve Area “Sierra de Huautla”. Native vegetation is …


Grasslands For Production And The Environment, David R. Kemp, David L. Michalk Mar 2022

Grasslands For Production And The Environment, David R. Kemp, David L. Michalk

IGC Proceedings (1997-2023)

Key points

1. To manage grasslands for production and enhanced environmental values requires a redefinition of the frameworks within which management decisions are made, and a tailoring of practices to suit the ways that farmers operate.

2. Improving the perenniality and permanence of grasslands usually leads to better environmental and production outcomes.

3. There is a case for a more conservative approach to utilising grasslands in order to sustain the functioning of local ecosystems and to improve water quality, nutrient and energy cycling and biodiversity.

4. A landscape rather than paddock focus is more appropriate for meeting current grassland management …


Grassland In Ireland And The Uk, Myles Rath, S. Peel Mar 2022

Grassland In Ireland And The Uk, Myles Rath, S. Peel

IGC Proceedings (1997-2023)

Key points

1. Grassland is the dominant land use option in Ireland and the UK, and is characterised by a long growing season.

2. Dynamic, interactive systems of grassland management have been developed which combine high grass dry matter intakes with good sward quality. In the better grassland areas milk yields in excess of 7000 kg/cow are attainable with low levels of concentrate supplementation.

3. In the times to come, measures to protect the environment will constrain stocking rates, and fertiliser and manure use on intensive grassland enterprises.

4. A high proportion of beef and sheep farms participate in voluntary, …


Phylogenomic Discordance Suggests Polytomies Along The Backbone Of The Large Genus Solanum, Edeline Gagnon, Rebeccca Hilgenhof, Andrés Orejuela, Angela J. Mcdonnell, Gaurav Sablok, Xavier Aubriot, Leandro Giacomin, Yuri Gouvêa, Thamyris Bragionis, João Renato Stehmann, Lynn Bohs, Steven Dodsworth, Christopher T. Martine, Péter Poczai, Sandra Knapp, Tiina Särkinen Feb 2022

Phylogenomic Discordance Suggests Polytomies Along The Backbone Of The Large Genus Solanum, Edeline Gagnon, Rebeccca Hilgenhof, Andrés Orejuela, Angela J. Mcdonnell, Gaurav Sablok, Xavier Aubriot, Leandro Giacomin, Yuri Gouvêa, Thamyris Bragionis, João Renato Stehmann, Lynn Bohs, Steven Dodsworth, Christopher T. Martine, Péter Poczai, Sandra Knapp, Tiina Särkinen

Faculty Journal Articles

Premise of the study

Evolutionary studies require solid phylogenetic frameworks, but increased volumes of phylogenomic data have revealed incongruent topologies among gene trees in many organisms both between and within genomes. Some of these incongruences indicate polytomies that may remain impossible to resolve. Here we investigate the degree of gene-tree discordance in Solanum, one of the largest flowering plant genera that includes the cultivated potato, tomato, and eggplant, as well as 24 minor crop plants.

Methods

A densely sampled species-level phylogeny of Solanum is built using unpublished and publicly available Sanger sequences comprising 60% of all accepted species (742 spp.) …


Can High Density, Short Duration Grazing Replace Fire In A South African Mesic Grassland?, N. M. Chonco, S. C. Nkuna Jan 2022

Can High Density, Short Duration Grazing Replace Fire In A South African Mesic Grassland?, N. M. Chonco, S. C. Nkuna

IGC Proceedings (1997-2023)

High density grazing (HDG), defined as the concentration of many livestock on a small area for a short period of time has become increasingly popular in the South African mesic grassland yet little is known about it impact. HDG is usually applied without fire, based on the assertion that it is a key contributor to desertification of grasslands. However, fire plays an important role in the development and growth of most South African mesic grassland plant species, as it stimulates resprouting and reduces competition for light. The aim of this study was to determine the impacts of high density grazing …


Manipulating Species Diversity: Environmental Impacts In Row Crop, Livestock, And Grassland Agroecosystems, Alayna A. Jacobs Jan 2022

Manipulating Species Diversity: Environmental Impacts In Row Crop, Livestock, And Grassland Agroecosystems, Alayna A. Jacobs

Theses and Dissertations--Plant and Soil Sciences

The diversity of living species in an agroecosystem affects both natural resources and agricultural production efficiency. The rise of managed plant monocultures has allowed agricultural yields to increase over time. However, simplifying agroecosystems affects the capacity of the system to sustainably provide clean air, water, and productive soils essential for continued food and fiber production. This dissertation manipulates species diversity in row crop and forage agroecosystems prevalent in the Eastern United States and tracks the associated environmental and agricultural production consequences.

In row crop agroecosystems, increasing plant diversity with winter cover crops has been suggested as a strategy to increase …


Limacella Subtropicana (Amanitaceae, Agaricales), A New Species From Pakistan Based On Morphological And Molecular Phylogenetic Evidences, Aiman Izhar, Abdul Rehman Niazi, Muhammad Asif, Muhammad Haq Nawaz, Hira Bashir, Abdul Nasir Khalid Jan 2022

Limacella Subtropicana (Amanitaceae, Agaricales), A New Species From Pakistan Based On Morphological And Molecular Phylogenetic Evidences, Aiman Izhar, Abdul Rehman Niazi, Muhammad Asif, Muhammad Haq Nawaz, Hira Bashir, Abdul Nasir Khalid

Turkish Journal of Botany

Basidiomata of a hitherto undescribed Limacella species were collected from the grasslands of Punjab, Pakistan. We describe it as Limacella subtropicana, which is characterized by its viscid, white to creamy pileus, white to the creamy stipe, changing to brown when bruised, subglobose basidiospores measuring 4.0?6.3 × 3.7?5.5 ?m, an ixotrichodermal pileipellis with subcylindric to clavate terminal elements and the common presence of clamp connections in all tissues. Maximum likelihood and Bayesian inference analyses of ITS sequences and LSU sequences of nrDNA confirmed its placement in the genus Limacella. A comprehensive description and a comparison of the new taxon with other …


Regenerative Agriculture Effects On Invertebrate And Bird Communities And Insect-Provided Ecosystem Services, Alex Michels Jan 2022

Regenerative Agriculture Effects On Invertebrate And Bird Communities And Insect-Provided Ecosystem Services, Alex Michels

Electronic Theses and Dissertations

Conventional agricultural practices can have unintended consequences on the environment and wildlife. Insects and birds are declining at rapid rates around the world, and the current conventional agricultural paradigm is a major driver through habitat loss and the intensification of production. Invertebrates in agroecosystems provide services to both farmers and the rest of society. Regenerative systems may promote the functioning of an agroecosystem by influencing invertebrate abundance, diversity, and ecosystem services and mitigate bird and insect declines through conservation practices that increase soil health, reduce disturbances, and increase biological diversity. Here I address knowledge gaps of the effects of regenerative …


A Flora Of Coyote Ridge And Flat, Inyo County, California, Martin Purdy Jan 2022

A Flora Of Coyote Ridge And Flat, Inyo County, California, Martin Purdy

CGU Theses & Dissertations

California’s Sierra Nevada mountain range contains a disproportionate share of the state’s plant diversity and is one of the most floristically diverse regions of its size in the United States. The high Sierra Nevada, in particular, has been identified as an important center of species richness and endemism within California. Anthropogenic climate warming is expected to disproportionately affect mountain ecosystems, and models have predicted serious habitat contraction and extirpation for many alpine plant taxa. A specimen-based inventory of the vascular and non-vascular plants of Coyote Ridge and Flat was conducted to establish baseline data for one such sensitive alpine and …


Shackletonia Backorii - A New Species Of Lichenised Fungus From James Ross Island (Antarctic Peninsula), Mehmet Gökhan Halici, Mi̇that Güllü, Ekrem Bölükbaşi, Merve Kahraman Yi̇ği̇t Jan 2022

Shackletonia Backorii - A New Species Of Lichenised Fungus From James Ross Island (Antarctic Peninsula), Mehmet Gökhan Halici, Mi̇that Güllü, Ekrem Bölükbaşi, Merve Kahraman Yi̇ği̇t

Turkish Journal of Botany

The new lichen species Shackletonia backorii Halıcı, Güllü & Kahraman is described from James Ross Island, which is located in the North-East Antarctic Peninsula region. The new species is morphologically most similar to S. insignis (Søchting & Øvstedal) Søchting, Frödén & Arup, which was described from Livingstone Island (North-West Antarctic Peninsula region). These two species have a similar bluish grey to blackish thallus with a microfruticose and coralloid structure and red brown or almost black zeorine apothecia, but S. backorii has rhomboid ascospores and grows on soil whereas S. insignis has ellipsoid ascospores and occurs in sheltered crevices of rocks. …