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Genetic And Transcriptomic Analyses Of The Rice Pathogenic Bacterium, Burkholderia Glumae, Reveal The Important Roles Of The Regulatory Gene, Tepr, For Bacterial Survival In Environmental Stresses, Jingyu Peng
LSU Master's Theses
Burkholderia glumae causes bacterial panicle blight in rice by producing the phytotoxin, toxoflavin, as a major virulence factor. Production of toxoflavin is negatively regulated by tepR, which encodes a sigma 54-dependent response regulator. In order to gain insights into the comprehensive biological functions of tepR, the genome-wide transcriptional profile dependent on tepR was analyzed through comparative transcriptome analysis between a tepR defective mutant and the wild-type strain, resulting in the identification of 238 differentially expressed genes (DEGs). Gene Ontology (GO) enrichment analysis indicated that genes involved in flagella assembly and stress response were highly enriched in tepR defective strain. Kyoto …
Characterization Of A Σ54-Dependent Response Regulator, Tepr, In The Rice-Pathogenic Bacterium Burkholderia Glumae And Development Of Biocontrol Strategies For Bacterial Panicle Blight Of Rice, Surendra Osti
LSU Master's Theses
Bacterial panicle blight, caused by Burkholderia glumae, is a major bacterial disease of rice in Louisiana. This bacterium contains several virulence factors required for disease development such as toxoflavin, lipase and flagella. In a genome-wide search for regulatory factors related to the virulence of B. glumae, tepR was identified as a negative regulator for toxoflavin production and found to encode a sigma 54-dependent response regulator. TepR is homologous to LuxO, a quorum-sensing signaling component of Vibrio spp. A markerless tepR deletion mutant of B. glumae 336gr-1, LSUPB401, produced more toxoflavin and showed higher lipase and protease activities compared to the …