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Physical Sciences and Mathematics

WWU Honors College Senior Projects

2020

Synthesis

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Sorting Out Sortases: Designing A Better Enzyme And Synthesizing Trapping Peptides Towards Capturing A Bound-State Structure, Katherine Johnston Apr 2020

Sorting Out Sortases: Designing A Better Enzyme And Synthesizing Trapping Peptides Towards Capturing A Bound-State Structure, Katherine Johnston

WWU Honors College Senior Projects

Sortase A is a powerful protein engineering tool that cleaves proteins and attaches them to an acyl acceptor of choice. However, the most active wild type variants of sortase A only show high activity at a limited number of cleavage motifs, and so work is underway to create a variant of sortase A that shows high activity at a greater variety of cleavage sites. Additionally, current studies attempting to optimize the enzyme require a way to stabilize an unstructured loop for the crystallization, in order to collect X-ray diffraction structural data. Here, preliminary results from the design of an “loop-swapped” …