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Empirical Likelihood-Based Nonparametric Inference For The Difference Between Two Partial Aucs, Yan Yuan

Mathematics Theses

Compare the accuracy of two continuous-scale tests is increasing important when a new test is developed. The traditional approach that compares the entire areas under two Receiver Operating Characteristic (ROC) curves is not sensitive when two ROC curves cross each other. A better approach to compare the accuracy of two diagnostic tests is to compare the areas under two ROC curves (AUCs) in the interested specificity interval. In this thesis, we have proposed bootstrap and empirical likelihood (EL) approach for inference of the difference between two partial AUCs. The empirical likelihood ratio for the difference between two partial AUCs is …

A Method For Finding Standard Error Estimates For Rma Expression Levels Using Bootstrap, Gabriel Nicholas

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Oligonucleotide arrays are used in many applications. Affymetrix GeneChip arrays are widely used. Before researchers can use the information from these arrays, the raw data must be transformed and summarized into a more meaningful and usable form. One of the more popular methods for doing so is RMA (Robust Multi-array Analysis).

A problem with RMA is that the end result (estimated gene expression levels) is based on a fairly complicated process that is unusual. Specifically, there is no closed-form estimate of standard errors for the estimated gene expression levels. The current recommendation is to use a naive estimate for the …