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Scale And Habitat Effects On Measurement Of Streptomyces Biogeography And Biodiversity, Terilyn A. Stoflet Jan 2024

Scale And Habitat Effects On Measurement Of Streptomyces Biogeography And Biodiversity, Terilyn A. Stoflet

Cal Poly Humboldt theses and projects

Bacteria in the genus Streptomyces are detected in most soils around the world, as well as on and in seeds, plants, animals, insects and the wind. Currently, more than 700 valid species of Streptomyces have been identified worldwide. Streptomyces produce the majority of antibiotics, antivirals and antifungals, as well as important agricultural bioactive molecules due to their unique genetic capabilities. Their distinct genetic abilities allow them to produce an unlimited amount of biosynthetic gene clusters, or BGC’s. Although many compounds come from Streptomyces, scientists have not discovered the biogeographic patterns of this genus. The biogeography of Streptomyces is a …


Rodent Dental Microwear Texture Analysis As A Proxy For Fine-Scale Paleoenvironment Reconstruction, Jenny H. E. Burgman May 2022

Rodent Dental Microwear Texture Analysis As A Proxy For Fine-Scale Paleoenvironment Reconstruction, Jenny H. E. Burgman

Graduate Theses and Dissertations

Dental microwear texture analysis (DMTA) of fossil fauna has become a valuable tool for dietary inference and paleoenvironment reconstruction. Most of this work has utilized larger taxa with larger home ranges. These studies may result in broader-scale habitat inferences that could mask the details of complex mosaic habitats. Rodent DMTA offers an opportunity to work at finer spatial scales because most species have smaller home ranges. Rodents are also keystone species within their ecosystems, abundant, ubiquitous, and found in many fossil deposits. These attributes make them excellent proxies for environmental reconstructions. However, the application of DMTA to rodents remains relatively …


Ecological Study Of Iris Unguicularis Cretensis In The Coastal Region Of Syria في المنطقة الساحلية من سورية (Iris Unguicularis Cretensis) دراسة بيئية لنبات سوسن كريت, Zuheir Shater, Tharwat Ibrahim, Mohammad Korbaissa Mar 2022

Ecological Study Of Iris Unguicularis Cretensis In The Coastal Region Of Syria في المنطقة الساحلية من سورية (Iris Unguicularis Cretensis) دراسة بيئية لنبات سوسن كريت, Zuheir Shater, Tharwat Ibrahim, Mohammad Korbaissa

Arab Journal of Arid Environments المجلة العربية للبيئات الجافة

This search was conducted during 2014 - 2017 in order to determine the distribution area of Iris unguicularis cretensis in the coastal region of Syria, to evaluate the current situation of its habitats, and to determine the best method to reproduce this plant and evaluate its nutritive value as forage. The distribution area was identified through 12 field trips at various types of parent rocks, expositions, and altitudes along the western versant of the coastal mountains in Syria. The properties of natural habitat was examined in 37 samples distributed along a gradient extending from 300 to 1000 m above sea …


Early Life History Of Tarpon (Megalops Atlanticus) In South Carolina Estuaries: Assessment Of Juvenile Recruitment And Validity Of Aging And Back-Calculation Methods, Garrett M. Elmo Dec 2020

Early Life History Of Tarpon (Megalops Atlanticus) In South Carolina Estuaries: Assessment Of Juvenile Recruitment And Validity Of Aging And Back-Calculation Methods, Garrett M. Elmo

Electronic Theses and Dissertations

No abstract provided.


Survival Of Off-Host Rhipicephalus (Boophilus) Annulatus (Acari: Ixodidae) Larvae In Study Arenas In Relation To Climatic Factors And Habitats In South Texas, Usa, Emily Jesselle Zamora May 2020

Survival Of Off-Host Rhipicephalus (Boophilus) Annulatus (Acari: Ixodidae) Larvae In Study Arenas In Relation To Climatic Factors And Habitats In South Texas, Usa, Emily Jesselle Zamora

Theses and Dissertations

The cattle fever tick, Rhipicephalus (Boophilus) annulatus (Say), is an economically destructive arthropod because of its ability to vector bovine babesiosis. Cattle fever ticks can spend more than 90% of their life cycle as questing larvae, but the effect of climatic factors on their off-host behavior and survival is unclear. The goal of this study was to measure the effects of specific ecological factors on off-host larvae in nature. The study was conducted in a south Texas pasture over a 20-mo period, during which time larval populations were surveyed and ambient weather variables - relative humidity and temperatures – were …


Survival Of Off-Host Unfed Rhipicephalus (Boophilus) Annulatus (Acari: Ixodidae) Larvae In Study Arenas In Relation To Climatic Factors And Habitats In South Texas, Usa, Emily J. Zamora, Brenda Leal, Donald B. Thomas, Robert K. Dearth Jan 2020

Survival Of Off-Host Unfed Rhipicephalus (Boophilus) Annulatus (Acari: Ixodidae) Larvae In Study Arenas In Relation To Climatic Factors And Habitats In South Texas, Usa, Emily J. Zamora, Brenda Leal, Donald B. Thomas, Robert K. Dearth

Biology Faculty Publications and Presentations

The cattle fever tick, Rhipicephalus annulatus (Say), is an economically destructive arthropod because of its ability to vector bovine babesiosis. Cattle fever ticks can spend more than 90% of their life cycle as questing larvae, but the effect of climatic factors on their off-host behavior and survival is unclear. The goal of this study was to measure the effects of specific ecological factors on off-host larvae in nature. The study was conducted in a south Texas pasture over a 20-mo period, during which time larval populations were surveyed and ambient weather variables - relative humidity and temperatures - were recorded. …


Where Birds Chill: An Assessment Of The Habitat Preferences Of Birds Overwintering In Hudson Valley Forests, Elizabeth Claire Axley Jan 2019

Where Birds Chill: An Assessment Of The Habitat Preferences Of Birds Overwintering In Hudson Valley Forests, Elizabeth Claire Axley

Senior Projects Spring 2019

Many avian species overwinter in eastern North America; however, studies on bird populations are rarely undertaken during this critical survival time, and little is known as to their habitat preferences and foraging behavior. In this observational study, we performed a survey of birds overwintering in the Hudson Valley’s temperate, primarily-deciduous forests, assessing avian populations’ habitat preferences through the vegetative structural variables surrounding overwintering birds as they forage. Our results suggest that high canopy cover is critically important to predicting overwintering bird occupancy on a microhabitat scale. Moreover, overwintering birds preferentially occupy forest plots not dominated by sugar maples, in spite …


Environmental Predictors For The Distribution Of The Caspian Green Lizard, Lacerta Strigata Eichwald, 1831, Along Elevational Gradients Of The Elburz Mountains In Northern Iran, Anooshe Kafash, Sohrab Ashrafi, Annemarie Ohler, Benedikt Rudolf Schmidt Jan 2019

Environmental Predictors For The Distribution Of The Caspian Green Lizard, Lacerta Strigata Eichwald, 1831, Along Elevational Gradients Of The Elburz Mountains In Northern Iran, Anooshe Kafash, Sohrab Ashrafi, Annemarie Ohler, Benedikt Rudolf Schmidt

Turkish Journal of Zoology

Within its range, the Caspian green lizard, Lacerta strigata, occurs in the Elburz Mountains (northern Iran) at elevations from below sea level to approximately 2700 m a.s.l. To determine the environmental factors affecting the distribution of this lizard, we used an ensemble approach to model the distribution of the Caspian green lizard (Lacerta strigata) in Iran using four algorithms (generalized boosted model, maximum entropy, generalized linear model, random forest). Results revealed that low-elevation habitats between the Elburz Mountains and the Caspian Sea are the most suitable habitats for the species. The normalized difference vegetation index (NDVI), annual precipitation (both with …


Bats Of St. Vincent, Lesser Antilles, Gary G. Kwiecinski, Scott C. Pedersen, Hugh H. Genoways, Peter A. Larsen, Roxanne J. Larsen, Justin D. Hoffman, Fitzroy Springer, Carleton J. Phillips, Robert J. Baker Oct 2018

Bats Of St. Vincent, Lesser Antilles, Gary G. Kwiecinski, Scott C. Pedersen, Hugh H. Genoways, Peter A. Larsen, Roxanne J. Larsen, Justin D. Hoffman, Fitzroy Springer, Carleton J. Phillips, Robert J. Baker

University of Nebraska State Museum: Mammalogy Papers

The chiropteran fauna of the island of Saint Vincent, represented by 12 species, is among the most complex in the Lesser Antilles, being represented by four families including Noctilionidae (1 species), Mormoopidae (1), Phyllostomidae (8), and Molossidae (2). This fauna includes four trophic guilds as represented by Noctilio leporinus (piscivore/insectivore); Glossophaga longirostris and Monophyllus plethodon (nectarivore/pollenivore); Artibeus lituratus, A. schwartzi, Brachyphylla cavernarum, Ardops nichollsi, and Sturnira paulsoni (frugivore); and Pteronotus fuscus, Micronycteris buriri, Molossus molossus, and Tadarida brasiliensis (insectivore). One species—Micronycteris buriri—and two subspecies—Sturnira paulsoni paulsoni and Ardops nichollsi vincentensis …


Population Dynamics Of Off-Host Rhipicephalus (Boophilus) Microplus (Acari: Ixodidae) Larvae In Response To Habitat And Seasonality In South Texas, Brenda Leal, Donald B. Thomas, Robert K. Dearth Mar 2018

Population Dynamics Of Off-Host Rhipicephalus (Boophilus) Microplus (Acari: Ixodidae) Larvae In Response To Habitat And Seasonality In South Texas, Brenda Leal, Donald B. Thomas, Robert K. Dearth

Biology Faculty Publications and Presentations

The cattle tick, Rhipicephalus microplus (Canestrini), is an economically destructive arthropod because of its ability to vector bovine babesiosis. It is known that cattle ticks can spend 80–90% of their lifecycle as questing larvae, yet the effect of climatic factors on their off-host behavior and survival is unclear. The goal of this study was to measure the effects of specific ecological factors on off-host questing larvae in nature. The study was conducted in a south Texas pasture over a two-year period, during which time larval populations were surveyed. Simultaneously, weather variables—precipitation, relative humidity, and ambient temperatures—were recorded. Larval survival rates …


The Spatial Ecology And Microhabitat Selection Of The Pygmy Rattlesnake (Sistrurus Miliarius) In Southwestern Missouri, Dylan Wallace Maag Dec 2017

The Spatial Ecology And Microhabitat Selection Of The Pygmy Rattlesnake (Sistrurus Miliarius) In Southwestern Missouri, Dylan Wallace Maag

MSU Graduate Theses

Despite a wide distribution throughout the southeastern United States, pygmy rattlesnakes (Sistrurus miliarius) have received less research attention than many other rattlesnake species. I captured a total of 33 S. miliarius at the Drury-Mincy Conservation Area (DMCA) and retained 14 large individuals (mostly gravid females) for a radio telemetry study. Snakes were primarily captured during evening road driving surveys and were encountered rarely with any other sampling technique. Sistrurus miliarius are widespread at DMCA where they were encountered in forest, savanna, and glade habitats. Snakes selected microhabitats with more vegetative cover and tree canopy closure than random sites …


Bird Communities Of Different Woody Vegetation Types From The Niraj Valley, Romania, Erzsébet Domokos, József Domokos Jan 2016

Bird Communities Of Different Woody Vegetation Types From The Niraj Valley, Romania, Erzsébet Domokos, József Domokos

Turkish Journal of Zoology

In this paper, the bird assemblages of different woody vegetation types are presented in a human-modified Eastern European landscape. The studied territory is part of a Special Protection Area for bird species. The following sampling areas were included in the study: hornbeam-beech, oak-hornbeam, and sessile oak forests; thickets of willow; forests of white willow; scrubs of blackthorn and hawthorn; and orchards. Birds were grouped in a community typical of deciduous forests and in another community typical of coppices and scrubs. Bird species number, alpha diversity, and abundance were significantly higher in the Salici-Populetum association and in orchards than in the …


Composition And Diversity Of Avian Communities Using A New Urban Habitat: Green Roofs, Brian E. Washburn, Ryan M. Swearingin, Craig K. Pullins, Matthew E. Rice Jan 2016

Composition And Diversity Of Avian Communities Using A New Urban Habitat: Green Roofs, Brian E. Washburn, Ryan M. Swearingin, Craig K. Pullins, Matthew E. Rice

United States Department of Agriculture Wildlife Services: Staff Publications

Green roofs on buildings are becoming popular and represent a new component of the urban landscape. Public benefits of green roof projects include reduced stormwater runoff, improved air quality, reduced urban heat island effects, and aesthetic values. As part of a city-wide plan, several green roofs have been constructed at Chicago’s O’Hare International Airport (ORD). Like some other landscaping features, green roofs on or near an airport might attract wildlife and thus increase the risk of bird–aircraft collisions. During 2007–2011, we conducted a series of studies to evaluate wildlife use of newly constructed green roofs and traditional (gravel) roofs on …


An Assessment Of South China Tiger Reintroduction Potential In Hupingshan And Houhe National Nature Reserves, China, Yiyuan Qin, Philip J. Nyhus, Courtney L. Larson, Charles J.W. Carroll, Jeff Muntifering, Thomas D. Dahmer, Lu Jun, Ronald L. Tilson Dec 2014

An Assessment Of South China Tiger Reintroduction Potential In Hupingshan And Houhe National Nature Reserves, China, Yiyuan Qin, Philip J. Nyhus, Courtney L. Larson, Charles J.W. Carroll, Jeff Muntifering, Thomas D. Dahmer, Lu Jun, Ronald L. Tilson

Philip J. Nyhus

Human-caused biodiversity loss is a global problem, large carnivores are particularly threatened, and the tiger (Panthera tigris) is among the world’s most endangered large carnivores. The South China tiger (Panthera tigris amoyensis) is the most critically endangered tiger subspecies and is considered functionally extinct in the wild. The government of China has expressed its intent to reintroduce a small population of South China tigers into a portion of their historic range as part of a larger goal to recover wild tiger populations in China. This would be the world’s first major tiger reintroduction program. A free-ranging population of 15–20 tigers …


Habitat Use Of The Key Largo Woodrat (Neotoma Floridana Smalli), Lauren J. Barth Nov 2014

Habitat Use Of The Key Largo Woodrat (Neotoma Floridana Smalli), Lauren J. Barth

FIU Electronic Theses and Dissertations

Key Largo woodrats are an endangered subspecies with an extremely limited habitat. This study sought to understand woodrat habitat preferences in order to guide management. Woodrats build stick nests from natural and artificial materials, so nest distribution and nest occupancy were used as indicators of preference. Distribution was determined by nest surveys, and remote cameras were used to assess occupancy. Forest structure, human disturbance, nest, and animal presence metrics were also collected. More nests were found along abandoned roads than along forest transects and more artificial nests were occupied than natural nests. These findings indicate that woodrats prefer areas with …


Behavioural Ecology Of The Black-Flanked Rock-Wallaby (Petrogale Lateralis Lateralis): Refuge Importance In A Variable Environment, Craig Pentland Jan 2014

Behavioural Ecology Of The Black-Flanked Rock-Wallaby (Petrogale Lateralis Lateralis): Refuge Importance In A Variable Environment, Craig Pentland

Theses: Doctorates and Masters

The black-flanked rock-wallaby (Petrogale lateralis lateralis) has suffered a significant decline in its distribution in Western Australia. This has been attributed to introduced predators (predominantly the red fox) and herbivores, fire, and habitat destruction due to clearing. Although since 2001 the Department of Environment and Conservation (DEC) had begun to reintroduce this species back into its former range, little was known of the behavioural ecology of this species. Fox control in the 1980s and 1990s resulted in population increases of rock-wallabies on several reserves in the central wheatbelt of WA. However, recently these populations have rapidly declined despite continuing fox …


Ecology Of Glacial Relict Fishes In South Dakota's Sandhills Region, Eli Felts Jan 2013

Ecology Of Glacial Relict Fishes In South Dakota's Sandhills Region, Eli Felts

Electronic Theses and Dissertations

Native stream fish zoogeography has changed substantially across North America during the last century as habitat degradation, stream fragmentation and introductions of nonnative species have led to numerous extinctions, extirpations and altered distributions. Insufficient information regarding imperiled species often results in reactive, rather than proactive, management, and knowledge of species status and ecology is critical in identifying conservation priorities. South Dakota populations of three dace species (northern redbelly dace Chrosomus eos, finescale dace Chrosomus neogaeus, and pearl dace Margariscus margarita) are relict of Pleistocene Glaciation and are isolated from the northern core of their distribution, but little information exists regarding …


Does Pitcher Plant Morphology Affect Spider Residency?, Marc A. Milne, Deborah A. Waller Jan 2013

Does Pitcher Plant Morphology Affect Spider Residency?, Marc A. Milne, Deborah A. Waller

Biological Sciences Faculty Publications

Spiders are often found as residents in association with Sarracenia purpurea ( Purple Pitcher Plant). Many spiders choose web locations based on environmental cues such as vegetation structure and composition, prey density, temperature, and humidity. To determine if spiders use cues from the Purple Pitcher Plant to build their webs, we conducted a field study using variants of the plant that separated various morphological features: nectar, pigment, and the presence of prey. There was no difference in spider residency across all treatments and no difference in male/female or mature/immature residency. Linyphiids were the most common residents, possibly due to pitcher …


Ecology Of The Rock Rattlesnake, Crotalus Lepidus, In The Northern Chihuahuan Desert, Vicente Mata Silva Jan 2011

Ecology Of The Rock Rattlesnake, Crotalus Lepidus, In The Northern Chihuahuan Desert, Vicente Mata Silva

Open Access Theses & Dissertations

The Rock Rattlesnake, Crotalus lepidus is a small species that is found from southern Arizona, southern New Mexico, and southern Texas, in the U.S., into northern Mexico. To date, little is known about the ecology of this species. Ecological information is becoming desperately needed for supporting the conservation and protection of species living in fragile environments such as the Chihuahuan Desert amid current local and global threats (e.g., habitat destruction and modification, urban development, and climate change). Although rattlesnakes spend a significant amount of time underground while overwintering, little is known about the physiology and behavior of these organisms during …


Taxonomy And Ecology Of The Western Australian Soldier Crab, Mictyris Occidentalis (Crustacea: Decapoda: Brachyura: Mictyridae), Joyleen Florence Unno Jan 2011

Taxonomy And Ecology Of The Western Australian Soldier Crab, Mictyris Occidentalis (Crustacea: Decapoda: Brachyura: Mictyridae), Joyleen Florence Unno

Theses: Doctorates and Masters

The taxonomy and autoecology of the Western Australian soldier crab, Mictyris occidentalis Unno, 2008 is presented including a new species description, a comprehensive ichnology, sampling methods, an extensive habitat description and a decadal population dynamics study. Such a wide ranging, holistic study has not been carried out for any mictyrid specious previously. In detail, a taxonomy component compares M. occidentalis with congeners, clearly establishing it as a separate species from M. longicarpus to which it was previously referred, and the issues affecting taxonomic classification in the Mictyris genus in general are discussed. A species identification key is provided for the …


Habitat Associations Of The Long-Nosed Potoroo (Potorous Tridactylus) At Multiple Spatial Scales, Melinda A. Norton, Kristine O. French, Andrew W. Claridge Jan 2010

Habitat Associations Of The Long-Nosed Potoroo (Potorous Tridactylus) At Multiple Spatial Scales, Melinda A. Norton, Kristine O. French, Andrew W. Claridge

Faculty of Science - Papers (Archive)

This study examined the coarse- and fine-scale habitat preferences of the long-nosed potoroo (Potorous tridactylus) in the Southern Highlands of New South Wales, in order to inform the management of this threatened species. Live-trapping was conducted in autumn and spring, from 2005 to 2008, at two sites. Macrohabitat preferences were examined by comparing trap success with numerous habitat attributes at each trap site. In spring 2007 and autumn 2008, microhabitat use was also examined, using the spool-and-line technique and forage digging assessments. While potoroos were trapped in a wide range of macrohabitats, they displayed some preference for greater canopy and …


Relation Of Riparian Buffer Strips To In-Stream Habitat, Macroinvertebrates And Fish In A Small Iowa Stream, Jeremy P. Duehr, Michael J. Siepker, Clay L. Pierce, Thomas M. Isenhart Jan 2006

Relation Of Riparian Buffer Strips To In-Stream Habitat, Macroinvertebrates And Fish In A Small Iowa Stream, Jeremy P. Duehr, Michael J. Siepker, Clay L. Pierce, Thomas M. Isenhart

Journal of the Iowa Academy of Science: JIAS

Macroinvertebrate and fish habitat is often degraded as a result of agriculture. Riparian buffer strips are commonly used to counteract the negative effects of agriculture in headwater streams. We assessed the relation of multi-aged riparian buffer strips to in-stream habitat, macroinvertebrate and fish assemblages in an Iowa stream. In-stream habitat, macroinvertebrates, and fish were sampled from two buffered sites and two unbuffered sites, with the greatest substrate, water depth, and velocity heterogeneity occurring in buffered sites. The highest macroinvertebrate richness (11) as well as fish species richness (14), diversity (1.99) and IBI score (37) were found in the site buffered …


Relation Of Riparian Buffer Strips To In-Stream Habitat, Macroinvertebrates And Fish In A Small Iowa Stream, Jeremy P. Duehr, Michael J. Siepker, Clay L. Pierce, Thomas M. Isenhart Jan 2006

Relation Of Riparian Buffer Strips To In-Stream Habitat, Macroinvertebrates And Fish In A Small Iowa Stream, Jeremy P. Duehr, Michael J. Siepker, Clay L. Pierce, Thomas M. Isenhart

Journal of the Iowa Academy of Science: JIAS

Macroinvertebrate and fish habitat is often degraded as a result of agriculture. Riparian buffer strips are commonly used to counteract the negative effects of agriculture in headwater streams. We assessed the relation of multi-aged riparian buffer strips to in-stream habitat, macroinvertebrate and fish assemblages in an Iowa stream. In-stream habitat, macroinvertebrates, and fish were sampled from two buffered sites and two unbuffered sites, with the greatest substrate, water depth, and velocity heterogeneity occurring in buffered sites. The highest macroinvertebrate richness (11) as well as fish species richness (14), diversity (1.99) and IBI score (3 7) were found in the site …


Distribution And Habitat Of The Southern Two-Lined Salamander, Eurycea Cirrigera, In Will County, Illinois: Implications For Population Management And Monitoring, David Mauger, Timothy Bell, Eric L. Peters Jan 2000

Distribution And Habitat Of The Southern Two-Lined Salamander, Eurycea Cirrigera, In Will County, Illinois: Implications For Population Management And Monitoring, David Mauger, Timothy Bell, Eric L. Peters

Journal of the Iowa Academy of Science: JIAS

The southern two-lined salamander (Eurycea cirrigera) was found to occur at numerous localities within the Kankakee River State Park in Will County, Illinois. The species is restricted to small drainages within the Kankakee River valley that have flow consisting of groundwater that discharges at seeps or springs at or within the valley bluff. Cooler water temperatures and possibly other conditions that are associated with water derived from seep or spring sources may be important factors in determining salamander abundance. This is particularly relevant to larval habitat. These observations suggest that the spring or seep-fed larval habitat may be the primary …


The Influence Of Forest Fragmentation And Landscape Pattern On American Martens And Their Prey, Christina D. Hargis May 1996

The Influence Of Forest Fragmentation And Landscape Pattern On American Martens And Their Prey, Christina D. Hargis

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Habitat fragmentation occurs when large tracts of an orginal habitat are replaced by smaller patches of two or more habitat types, largely through human activities. I studied the behavior of six measures of landscape pattern that seemed appropriate for quantifying fragmentation, and used these measures to investigate the effects of forest fragmentation on American martens (Martes americana) and their prey. The measures I selected were edge density, contagion, mean nearest neighbor distance between patches, mean proximity index, perimeter-area fractal dimension, and mass fractal dimension. To test the behavior of these measures with a variety of landscape patterns, I …


Bulletin No. 31: Birds Of Connecticut College Arboretum - Population Changes Over Forty Years, Robert A. Askins, Glenn D. Dreyer May 1990

Bulletin No. 31: Birds Of Connecticut College Arboretum - Population Changes Over Forty Years, Robert A. Askins, Glenn D. Dreyer

Bulletins

No abstract provided.