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Comparison Of Cardiac Muscle Between Male And Female Rats With Exercise And Aging: Analyzing Vitals, Gdnf Expression, Ngf Expression, Rna Expression, Sympathetic Innervation, Parasympathetic Innervation, And Sensory Innervation, Katelyn Kurrie

Honors Theses

The direction of my research-based thesis answers the question of how exercise affects the cardiovascular system with aging in male and female rats. My study would highlight the important differences of the cardiovascular system of both sexes which could lead to sex-specific insight on the cardiovascular disease epidemic which prevails as the most common cause of death in the United States. The studies completed will test the hypothesis: neurotrophic factor will be higher in females than males due to the higher presence of estrogen in females. The trophic factor is predicted to increase in both males and females with regular …

An Examination Of Barriers And Determinates Impacting The Healthcare Of Kalamazoo County's Transgender And Non-Binary Young Adult Population, Tyler Signorella

Honors Theses

Historically non-binary and transgender individuals have faced and continue to face a unique set of obstacles and challenges in seeking and receiving general healthcare. Within the US this is well documented on a national level. In this exploratory study we will seek to understand the experience of young adults in Kalamazoo County comparing their perspectives to the already established pool of information. This will be accomplished through surveying emergent adults identifying as either transgender or gender non-binary within Kalamazoo County and then synthesizing this data into an analyzable collective format.

The Design And Validation Of A Qpcr-Based Approach To Cell Quantification Of Fungal-Algal Symbioses, Isabelle Katherine Garlotte

Honors Theses

Symbiotic relationships are extremely common in virtually all species. These relationships between organisms, particularly mutualistic symbioses, can have an incredibly large impact and can greatly affect the evolution of the species involved. Of particular interest is the suspected mutualistic relationship between green algae and fungi that may hold key evidence of how terrestrial plants evolved. In this experiment we established a method of quantifying the cells of each species involved in these symbioses through qPCR analysis to determine if the relationships are truly mutualistic. We developed a system for using DNA copies as a proxy for cell count in co-cultures …

Pharmacy: The Backbone Of Healthcare, Jordan Raye Myers

Honors Theses

The field of pharmaceuticals is growing and changing everyday. Being a part of the creation of new medicines and new treatments is a dream. Throughout my life my favorite subject has always been science, specifically where the sciences of biology and chemistry intersect. Biology and chemistry have significant overlap in the field of pharmacy. I believe that the passion and love I have for combining these two sciences will reflect in my career as a pharmacist and open doors for me to positively impact the lives of patients and the pharmaceutical field. I chose to pursue a career in pharmacy …

Exploring The Role Of Ccp1 And Ccp2 In The Chlamydomonas Reinhardtii Carbon Dioxide Concentrating Mechanism, Lillian Laplace

Honors Theses

No abstract provided.

Characterizing Drosophila Melanogaster Sleep Models Using An Optogenetic Engineered Caspase And Channelrhodopsins, Corey Cooper

Honors Theses

No abstract provided.

Ribosomal Rna Synthesis After Induced Nucleolar Stress In Drosophila Melanogaster, Kyle Maher

Honors Theses

No abstract provided.

A Summary Of Current Research Into Neurodegenerative Disorders Using Drosophila Melanogaster, Chase Cortese

Honors Theses

Neurodegenerative disorders such as Alzheimer’s disease are characterized by damage to neural cells causing widespread neurological deficits. Historically, these diseases were deemed as inevitable declines in cognitive and neurological function that occurred with aging. Recent research has revealed, however, that these diseases have molecular bases allowing potential clinical intervention. The groundbreaking discoveries have been made using differing model organisms, which can replicate the phenotype and physiological cause of these disorders. One major model organism that has been used is the fruit fly, Drosophila melanogaster. They have served various roles in elucidating gene pathways and neurophysiological bases seen in these diseases. …

A Meta-Analysis Of The Human Uses Of Pteridophytic Species In Tennessee, Diana Sevier

Honors Theses

Pteridophytes are an ancient lineage of plants, composed of ferns and fern allies, which are spread across the globe. There is also a long record of humans using pteridophytes to their benefit, which includes the broad categories of medicine, ornamentation, food, phytoremediation, and agriculture. Understanding these concepts, the goal of this thesis was to conduct a meta-analysis which pulled together data from many resources on the 94 Tennessee pteridophyte species to create a repository of human use information, as well as to examine, analyze, and comment on the trends present within and between taxonomic groups of pteridophytes. The methods used …

High-Efficiency Transformation Of Yeast By Electroporation, Lilly Ruell

Honors Theses

This paper analyzes and optimizes efficiency in the yeast transformation protocol using electroporation. Three variables were tested for optimization, they are the following: DNA concentration, cell density and electroporation voltage. Further verification of transformation was done through the analyzation of HPLC data to ensure protein production. The results conclude that DNA concentration was the most important dependent variable for transformation efficiency. A voltage of 2000V is the optimal condition to achieve efficient yeast transformation. Cell density had no observational difference in transformation efficiency at the range of DNA concentration necessary for research use. Improving this efficiency of the yeast transformations …

Investigating Human Follicle Stimulating Hormone Receptor And Its Partners Using The Apex Assay, Alexandra Temple

Honors Theses

Many men and women deal with fertility whether it’s needing infertility treatments or contraceptives. The follicle stimulating hormone (FSH) and follicle stimulating hormone receptor (FSHR) play important roles in reproduction and fertility in both males and females. Fertility issues can arise when interactions between FSH and FSHR aren’t functioning properly and FSHR signaling is disrupted. FSHR is a G-protein coupled receptor (GPCR) found on the cell surface of granulosa cells in women and Sertoli cells in men. Activated FSHR initiates a cascade of downstream signaling events that result in different biological effects such as ovarian follicular development and estrogen production …

Analyzing Thermal Gradients Using Terrestrial Laser Scanning In Scrub Oak Habitats, Alyssa Silbey

Honors Theses

Thermal microclimates are an important component of natural ecosystems because they provide appropriate niche space for many organisms; however, they are not widely studied because of their small scale. Likewise, variation in these microclimates may significantly impact animal thermoregulation and plant physiological processes and be especially important in the face of climate change. The goal of this study is to determine how the size and structure of Quercus ilicifolia shrubs influences ground temperature gradients. We hypothesized that differences in leaf cover and leaf area index (LAI) would cause temperature under shrubs to cool relative to the ambient temperature, and that …

Exploration Of Stable Isotope Analysis To Identify Prior Host In Ixodes Scapularis, Imogene Welles

Honors Theses

One of the most enigmatic concepts in tick-borne disease ecology is how to identify the prior host of a questing tick. The ability to do so would provide predictions to directly aid in controlling the spread of the many tick-borne pathogens, including the bacterial spirochete Borrelia burgdorferi, which causes Lyme disease in humans. I explored the application of a novel technique, stable isotope analysis (SIA), to identify the most recent host in molted Ixodes scapularis (black-legged tick). The common reservoir and feeding host, Peromyscus leucopus (white-footed mice; n = 46), were trapped, infested with nymphal ticks, and fed restricted …

Investigation Of Bax-Vdac Interactions And Their Role In Apoptosis, Marie Merrell

Honors Theses

Apoptosis is the process of programmed cell death. Increasing knowledge of this biological process can lead to understanding of neurodegenerative diseases and cancer alike. In mammals, this process occurs through mechanisms that are localized to the mitochondria. The release of cytochrome c is from the mitochondrial outer membrane (MOM) is regulated by pro and anti-apoptotic Bcl-2 family proteins. If the latter are successful, then cytochrome c’s release into the cytosol activates a caspase cascade, resulting in apoptosis of the cell. Pro-apoptotic Bax is present in complexes that contain voltage dependent anion channels (VDACs). We hypothesized that in healthy cells, VDACs …

Phenotypic Analysis Of S. Aureus Strains From University Student Health Centers And Environmental Controls, Antonio Teixeira

Honors Theses

Methicillin-resistant Staphylococcus aureus (MRSA) is a group of pathogenic bacterial strains resistant to a class of antibiotics that is a major cause for concern in health care systems. There is a lack of study in whether health care centers are reservoirs for these bacteria, especially within developed countries. Five environmental swab samples were collected from five different university health care centers across the region, and 16 swab samples from a general university environment. Any isolated bacterial strains collected underwent five biochemical tests (mannitol fermentation, DNase activity, oxidase activity, catalase activity, and coagulase activity) to preliminarily identify S. aureus bacteria. 24% …

Investigating The Efficacy Of Dna Damage With Bleach In Forensic Laboratories And At Crime Scenes, Alyssa Tuccinardi

Honors Theses

Household/commercial bleach (6% NaOCl, sodium hypochlorite) degrades DNA through oxidative damage, production of chlorinated base products, and cleavage of DNA strands (breaking it into smaller and smaller fragments). The presence of these lesions significantly impacts the ability to generate a full genetic profile from an evidentiary sample. In fact, knowledge of the damaging effect of bleach on DNA is the basis for its use in forensic laboratories to clean workbenches and prevent cross-contamination of samples between cases. Additionally, bleach is used intentionally by criminals to clean up crime scenes and destroy DNA evidence. A previous study demonstrated that bleach has …

The Effects Of Emotionally Appealing Messages On Perceptions About Marine Plastic Pollution: Implications For Science Communication On Social Media Outlets, Shelby Miller

Honors Theses

Marine plastic pollution (MPP) is one of the most pressing problems in the world today with many effects on ecological, economic, and social aspects of society. Global plastic production is around 322 million tons, with 10% of the world’s plastic products entering the ocean every year. Environmental campaigns use humor and shock in order to influence consumer behavior in regard to plastic products. Such approaches are important to utilize on social media in order to effectively communicate the issues posed by MPP. In this study, students and staff at the University of New Haven campus were given a survey containing …

Hiv-1 Tat Interactions With Opioids Are Modulated By Progesterone And Estradiol, Dejun Jackson

Honors Theses

HIV infection and combined substance abuse are comorbid epidemics. Previous studies show that concurrent opioid drug use may potentiate HIV-1-mediated neurotoxicity partly via interactions with opioids. Preclinical studies suggest that the HIV-1 trans-activator of transcription (Tat), an HIV regulatory protein, can synergize with opioids to exacerbate its already neurotoxic effects. However, its interactions with clinical opioids, such as oxycodone, have yet to be elucidated. Additionally, Tat disrupts a number of systems including the dopaminergic system, which contribute to its capacity to potentiate the rewarding effects of abused drugs. Although the neurotoxic effects of Tat may be inhibited by gonadal steroids …

The Raphe-Hippocampal Tract And Its Age Differences: Diffusion Tensor Imaging And Probabilistic Tractography Study, Ashley Sekul

Honors Theses

The raphe-hippocampal tract links the raphe nuclei to the hippocampus and is responsible for the production of the neurotransmitter serotonin. The hippocampus is key in regulating emotional and stress responses. This study utilized diffusion tensor imaging which uses Functional Magnetic Resonance Imaging to provide scans of the brain for analyzing differences in the raphe-hippocampal tract as one ages. In this specific study, 491 samples were visually analyzed to gather data about the fractional anisotropy of the raphe nuclei in both male and female brains ranging from 6 to 85 years old. Through the ranking of images, some were discarded, and …

Effects Of Repeated Intermittent Episodes Of Social Stress On The Acquisition And Extinction Of A Reward-Seeking Task, Nikki Sullivan

Honors Theses

Repeated exposure to stress is known to have a myriad of effects on the brain, contributing to the development of psychiatric disorders, such as anxiety, depression, and drug addiction. For example, rats undergoing repeated social stress develop increased cocaine self-administration. These effects of stress are not well-understood and are related to changes in the brain reward system. This study investigated the effects of repeated social stress on reward-seeking behavior via the acquisition and extinction of a discriminative stimulus (DS) task and on anxiety-like behavior in the elevated plus maze (EPM). Male rats underwent intermittent social defeat (4 sessions in 10 …

Crystallization Efforts For An Engineered Nickel-Binding Protein, Gold-Bovine Serum Albumin Nanoclusters, And An Artificial De Novo Tetramer Hydrogenase Mimic, Skyler Crane

Honors Theses

Protein crystallization is fundamental to modern research efforts given its ability to determine a protein’s structure as well as the interactions that structure allows and relies upon. This process, though lacking direct application, provides necessary information for subsequent research efforts for which applicationsmay be explored. As such, efforts were taken to crystallize nickel-binding protein (NBP) reengineered from Copper Storage Protein 1 (Csp1) in its apo and metal bound form, Bovine Serum Albumin (BSA) in its apo and gold bound form (Au-BSA), and an artificial de novo tetramer hydrogenase mimic peptide to better inform future research actions for these respective molecules. …

Ectomycorrhizal Fungi And Effects Of Soil Microbes Associated With Slash Pine Encroachment Into Native Longleaf Pine Habitat, Madison Brooke Woodruff

Honors Theses

Biological invasions can cause substantial changes to the environment: indigenous species can be reduced or even eliminated, soil characteristics shifted, and nutrient cycles altered. Ectomycorrhizal (ECM) fungi are thought to be key biological controllers of some plant invasions, especially benefiting Pinus species in invasions at exotic sites, but less is understood about the role of ECM fungi and other soil microbes in encroachment by one plant species into the habitat of another in their native ranges. In this study, soil was collected from three habitats in southern Mississippi, USA: native slash pine maritime forest, longleaf pine savanna encroached by slash …

Population Genetics Of A Recent Range Expansion By The Southern Pine Beetle, Dendroctonus Frontalis, Into The Northeastern United States, Megan Stubbs

Honors Theses

Population genetics as a field of study aims to determine the genetic variation among individuals in a population, and differences among populations. Certain population genetic analyses can provide such information and be used to better understand the biological aspects to a species’ expansion beyond its native range. The southern pine beetle (SPB), Dendroctonus frontalis, has become an invasive pest to pine forests in northeastern United States with its recent range expansion. Nine microsatellite loci were first developed and then used in analyses. To determine what the genetic variation is among individuals in SPB populations across its entire range, including …

The Effects Of High-Intensity Acute Exercise On Implicit Memory And Face-Name Explicit Memory, Morgan Gilbert

Honors Theses

Objective: The majority of previous research evaluate the effects of acute exercise on memory function have focused on explicit memory tasks involving word-list paradigms. For more real-world application, the present experiment evaluates whether high-intensity acute exercise can improve implicit memory function as well as increase one’s ability to remember names associated with faces (face-name paradigm). Methods: A two-arm, parallel-group, randomized controlled intervention was employed. Participants (N=91; M_age= 20 yrs) were randomized into one of two groups, including an experimental group and a control group. The experimental group exercised for 20 minutes on a treadmill at a high-intensity …

Exploring The Role Of Ccdc141 In Zebrafish Heart Development, Luci Strong

Honors Theses

Zebrafish are a good model organism in which to identify genes important for heart development because most human genes have a zebrafish ortholog and genes in zebrafish are relatively simple to modify. ccdc141 is a gene with unknown function, which we originally found to be highly expressed in cardiac cells in mouse embryos. In this project, we are seeking to determine the function of ccdc141 using zebrafish. To perform this experiment, we are targeting ccdc141 for mutation using CRISPR/Cas9. In this project we have analyzed ccdc141 to determine regions of conservation, designed CRISPR guides to target those regions (exon 2 …

Glucose Metabolism Of Breast Cancer Sub-Clones That Preferentially Metastasize To The Lungs And Bone, Anna G. Skubiz

Honors Theses

Malignant breast cancers exhibit preferential metastasis to bone and lung (1). While changes in gene expression in lung-specific (LM) and bone-specific metastasis (BoM) lines derived from the MDA-MB-231 breast cancer line have been identified, few metabolic genes are differentially expressed; thus it is unknown if tissue-specific metabolic reprogramming occurs. Two hallmarks of cancer cells are an altered metabolic phenotype characterized by enhanced conversion of glucose to lactate in spite of adequate oxygen availability for complete mitochondrial oxidation of this substrate (referred to as aerobic glycolysis or the Warburg effect) and a greater dependence on glutamine. These changes in primary tumor …

The Impact Of Age/Rage Signaling On Oxidative Stress Under Diabetic Conditions In Cardiac Fibroblasts, Christopher Dorroh

Honors Theses

Diabetes is a major health concern in the United States, with 1.5 million new cases diagnosed each year. Patients who suffer from diabetes have an increased risk of developing heart failure, a form of cardiovascular disease. Heart failure has been shown to result from increased left ventricular stiffness, which in turn is caused by increased remodeling of the extracellular matrix (ECM). This increase in ECM remodeling is a result of AGE/RAGE signaling, which occurs at a heightened level in the cardiac fibroblast cells of diabetics. Studies have shown that diabetics have elevated levels of AGEs (Advanced Glycation End-Products), which bind …

An Investigation Of The Practical Challenges To Using Molecular Genetic Techniques To Identify The Parasite Burdens Of Vertebrate Animals From Non-Invasive Sampling, Keely Ann Cox

Honors Theses

Molecular genetic techniques have become popular methods in ecology and wildlife conservation research. Advances in molecular genetic methods, particularly PCR (polymerase chain reaction), make it possible to amplify the numbers of specific DNA sequences from a sample with only a few original copies. Theoretically, the specificity of this approach should make it possible for wildlife biologists to identify and quantify the parasite and disease burden of endangered animals without being limited by the rarity of collaborators with expertise in the taxonomy of obscure parasite taxa. Because PCR requires just a small amount of DNA, the added benefit of a molecular …

Evaluation Of The Bax-Vdac Interaction And Their Influence On Apoptosis In Drosophila Melanogaster, Frances Marie Gatlin

Honors Theses

Apoptosis, also known as programmed cell death, is a cellular process used for development or for when cells undergo injury or stress. The Bcl2 family of proteins includes both pro-apoptotic and anti-apoptotic proteins that control the intrinsic pathway of apoptosis. Understanding the mechanisms and influence these proteins have on apoptosis is an important area of research focused on in Dr. Jones’s lab. Evidence shows a homology amongst the Bcl2 family of proteins at the BH3 domain. Dr. Jekabsons' lab has found a potential homology amongst VDAC 1-3 and the Bcl2 family at the BH3 domain.

Specifically, our lab is using …

Teacher Evaluation Of An Integrated Nutrition Curriculum For Mississippi Schools, Janiya A. Davis

Honors Theses

The prevalence of childhood obesity in the United States has more than tripled over the last four decades from 5 percent in 1978 to 18.5 percent in 2016, and according to the Mississippi Obesity Action Plan, 40.4% of Mississippi elementary school children (grades K-5) were either overweight or obese. Some reports have suggested that Mississippi’s overall obesity rate could reach 66.7% by 2030. Although the literature on best practices for the prevention of this condition is limited, some success has been achieved through the use of school-based nutrition interventions, in which children are taught how to make healthy food choices. …