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Preliminary Investigation Of Walking Motion Using A Combination Of Image And Signal Processing, Bradley Schneider, Tanvi Banerjee Dec 2016

Preliminary Investigation Of Walking Motion Using A Combination Of Image And Signal Processing, Bradley Schneider, Tanvi Banerjee

Kno.e.sis Publications

We present the results of analyzing gait motion in first-person video taken from a commercially available wearable camera embedded in a pair of glasses. The video is analyzed with three different computer vision methods to extract motion vectors from different gait sequences from four individuals for comparison against a manually annotated ground truth dataset. Using a combination of signal processing and computer vision techniques, gait features are extracted to identify the walking pace of the individual wearing the camera as well as validated using the ground truth dataset. Our preliminary results indicate that the extraction of activity from the video …


Pld-Specific Small-Molecule Inhibitors Decrease Tumor-Associated Macrophages And Neutrophils Infiltration In Breast Tumors And Lung And Liver Metastases, Karen M. Henkels, Naveen Reddy Muppani, Julian Gomez-Cambronero Nov 2016

Pld-Specific Small-Molecule Inhibitors Decrease Tumor-Associated Macrophages And Neutrophils Infiltration In Breast Tumors And Lung And Liver Metastases, Karen M. Henkels, Naveen Reddy Muppani, Julian Gomez-Cambronero

Biochemistry and Molecular Biology Faculty Publications

Phospholipase D-2 (PLD2) has a key role in breast cancer formation and metastasis formation with PLD small inhibitors reducing primary tumor growth. This study aimed to evaluate the importance of targeting PLD on the tumor microenvironment. We provide evidence about the beneficial effect of PLD inhibitors [FIPI (dual PLD1/PLD2) or VU0155072-2 (PLD2 inhibitor)] on avoiding infiltration of tumor-helping macrophages and neutrophils. Tumor growth and metastasis within the primary tumors had low (<20% over controls) PLD enzyme activity. Unexpectedly, we found that the inhibitors also affected PLD2 gene expression and protein albeit at a lesser extent. The later could indicate that targeting both the actual PLD enzyme and its activity could be beneficial for potential cancer treatments in vivo. F4/80 and Ly6G staining of macrophages and neutrophils, respectively, and Arg1 staining data were consistent with M2 and N2 polarization. NOS2 staining increased in xenotransplants …


Toxic Effect Of Lead Chloride On Antioxidant Enzyme In The Liver And Kidney Of Fish, Bakhtawar Raza, Muhammad Javed, Faiza Ambreen, Fariha Latif Nov 2016

Toxic Effect Of Lead Chloride On Antioxidant Enzyme In The Liver And Kidney Of Fish, Bakhtawar Raza, Muhammad Javed, Faiza Ambreen, Fariha Latif

Journal of Bioresource Management

The contamination of aquatic habitats has become a serious problem for sustainability of the fisheries sector in Pakistan. Among different pollutants, heavy metals are very toxic. Their toxicity can be assessed by using antioxidant enzymes as biomarkers. These enzymes protect the living organisms from the oxidative stress caused by the heavy metals. Therefore, the effect of lead chloride (PbCl2) on the peroxidase enzyme activity in the tissues (liver and kidney) of Cirrhinamrigala was investigated. Four groups of Cirrhinamrigala were exposed, separately, to 96-hr LC50 concentration of PbCl2 along with its sub-lethal concentrations, viz.2/3rd, 1/4th and 1/5th for a period of …


Characterization And Analysis Of Pcs1 Gene From Wheat, Haris Ahmed Khan, Ayaz Ahmad, Sehar Nawaz Nov 2016

Characterization And Analysis Of Pcs1 Gene From Wheat, Haris Ahmed Khan, Ayaz Ahmad, Sehar Nawaz

Journal of Bioresource Management

Wheat (Triticum aestivum) is an important cereal crop grown worldwide on large areas. Yields of wheat are decreasing worldwide due to heavy metal contamination. A number of genes have been characterized as those that confer tolerance to cadmium stress. PCS1 is one of them. Phytochelatins have a key role in the detoxification of heavy metals in plants. However, the mechanism behind the detoxification remains unknown and wheat genes related to detoxification have not yet been identified. Here we report the isolation of cDNA encoding of phytochelatin synthase (PCS) from wheat (var. Galaxy 2013). The AtPCS1 cDNA sequence contained …


Black-Legged Kittiwake (Rissa Tridactyla) In Karakoram: Record On Vagrancy, Fakhar -I- Abbas, Madeeha Manzoor, Imran Shah, Afsar Mian Nov 2016

Black-Legged Kittiwake (Rissa Tridactyla) In Karakoram: Record On Vagrancy, Fakhar -I- Abbas, Madeeha Manzoor, Imran Shah, Afsar Mian

Journal of Bioresource Management

A Black-legged Kittiwake (Rissa tridactyla; BLK) circumpolar shore bird was recorded on the Borith Lake (36°25'54.31"N, 74°51'44.09"E) 4,000-5,000 km away from the gull family bird's eastern or western normal habitat and 2000 km from its last report few years ago and 1500 km from nearest seashore. This report discusses the possible reasons and so far reported vagrancy of this bird.


Effect Of Manganese Chloride (Mncl2) On Peroxidase Activity In Labeo Rohita, Nadia Altaf, Muhammad Javed, Sidra Abbas Nov 2016

Effect Of Manganese Chloride (Mncl2) On Peroxidase Activity In Labeo Rohita, Nadia Altaf, Muhammad Javed, Sidra Abbas

Journal of Bioresource Management

Four groups (n=10) of one year old Labeo rohita were exposed to 96-hr LC50 and sub-lethal (2/3rd, 1/4th and 1/5th) concentrations of MnCl2 for a duration of 30 days in the glass aquaria of 50L water capacity. After an exposure period of 30 days, the activity of peroxidase enzyme in the liver and brain of MnCl2 exposed fish was measured and compared with the control group. Physico-chemical parameters of the test media, viz. pH, dissolved oxygen, carbon dioxide, total ammonia, total hardness, calcium and magnesium were also monitored on a 12 hour basis during the whole experimental duration by following …


Analyzing Clinical Depressive Symptoms In Twitter, Amir Hossein Yazdavar, Hussein S. Al-Olimat, Tanvi Banerjee, Krishnaprasad Thirunarayan, Amit P. Sheth Aug 2016

Analyzing Clinical Depressive Symptoms In Twitter, Amir Hossein Yazdavar, Hussein S. Al-Olimat, Tanvi Banerjee, Krishnaprasad Thirunarayan, Amit P. Sheth

Kno.e.sis Publications

350 million people are suffering from clinical depression worldwide.


An Investigation Of The Major Wheat Weeds In Different Zones Of Dera Ismail Khan, Zahid Usman, Ejaz Ahmad Khan, Iqtidar Hussain, Anis Ali Shah, Kalim Ullah, Muhammad Sadiq Jul 2016

An Investigation Of The Major Wheat Weeds In Different Zones Of Dera Ismail Khan, Zahid Usman, Ejaz Ahmad Khan, Iqtidar Hussain, Anis Ali Shah, Kalim Ullah, Muhammad Sadiq

Journal of Bioresource Management

On account of huge yield losses, weed infestation is a serious threat in wheat crops throughout the country. A comprehensive survey to find out the major weeds in wheat in Dera Ismail Khan was carried out during the crop season of 2012-13. Wheat fields at seed farms of Rakhmanghan, RakhZandani, Rata Kulachi and adjacent farmer’s fields to each seed farm were investigated. Data was collected at the peak growth stage of weeds and the quadratic method was used to record relative density (RD), relative frequency (RF), relative crowding coefficient (RCC) and importance value index (IVI). The results revealed that the …


Metal Mixtures Toxicity And Bioaccumulation In Tilapia Nilotica At 96-Hr Lc50 Exposure, Faiza Ambreen, Muhammad Javed Jul 2016

Metal Mixtures Toxicity And Bioaccumulation In Tilapia Nilotica At 96-Hr Lc50 Exposure, Faiza Ambreen, Muhammad Javed

Journal of Bioresource Management

Laboratory tests were conducted on fingerlings of Tilapia nilotica to check the bioaccumulation patterns of lead (Pb), cadmium (Cd) and cobalt (Co) during acute toxicity at constant water temperature, pH and total hardness. Metal mixtures viz. Lead + Cadmium, Cobalt-Lead and Cadmium-Cobalt were selected to assess the acute toxicity in terms of 96-hr LC50 along with bioaccumulation patterns in selected organs of Tilapia nilotica (skin, muscles and liver). Sensitivity of Tilapia nilotica in terms of 96-hr LC50 for all mixtures varied significantly. The 96-hr LC50 of binary metal mixtures agreed in that order: cadmium-cobalt > lead-cadmium > cobalt-lead with statistically significant differences …


A Survey Of Weed Varieties In Samanabad, Lahore, Sadaf Nazir, Beenish Zia Butt, Anjum Navid Jul 2016

A Survey Of Weed Varieties In Samanabad, Lahore, Sadaf Nazir, Beenish Zia Butt, Anjum Navid

Journal of Bioresource Management

A weed is an herbaceous plant that grows as a wild plant, and is considered a hindrance in the growth of preferred vegetation or cumbering the ground, and has no value for beauty or use. However, some weeds have roles in medicine, ecology and many other fields. A survey was conducted in Lahore to observe the weed varieties present in the area of Samanabad. The present study was carried out in May and June 2014.The primary purpose of the study was to gain knowledge about the availability of the total number of species present in this area. We also assessed …


Bistorta Amplexicaulis: A Brief Insight To Its Ethnobotany, Salma Batool, Muhammad Sheeraz Ahmed Jul 2016

Bistorta Amplexicaulis: A Brief Insight To Its Ethnobotany, Salma Batool, Muhammad Sheeraz Ahmed

Journal of Bioresource Management

Bistorta amplexicaulis (D. Don) Greene is an herb that belongs to the Family Polygonaceae. Its local name in Pakistan is Rain and masloon (Saqib and Sultan, 2005) and in India it is Sarbguni (Sharma et al., 2004).


Status Of Basic Taxonomic Skills In Botanical Articles Related To Azad Jammu And Kashmir, Pakistan: A Review, Arshad Mahmood Khan, Rahmatullah Qureshi, Mirza Faisal Qaseem, Waseem Ahmad, Zafeer Saqib, Tariq Habib Jul 2016

Status Of Basic Taxonomic Skills In Botanical Articles Related To Azad Jammu And Kashmir, Pakistan: A Review, Arshad Mahmood Khan, Rahmatullah Qureshi, Mirza Faisal Qaseem, Waseem Ahmad, Zafeer Saqib, Tariq Habib

Journal of Bioresource Management

The problems of synonymy, incorrect species author citation/abbreviation and spelling errors are hampering botanical research around the globe. This article was aimed to quantify the intensity and errors encountered in this regard in published botanical articles pertaining to the Azad Jammu and Kashmir, Pakistan. To address this issue, 100 articles published in 1999-2015 were reviewed. A total of 5460 entries were processed carefully and 1350 species binomials (excluding repititions) were extracted that were linked with 1333 accepted binomials according to theplantlist.org. Out of these accepted species binomials, 1109 were communicated correctly, whereas the remaining 224 binomials were conveyed in the …


What Motivates High School Students To Take Precautions Against The Spread Of Influenza? A Data Science Approach To Latent Modeling Of Compliance With Preventative Practice, William L. Romine, Tanvi Banerjee, William R. Folk, Lloyd H. Barrow Jul 2016

What Motivates High School Students To Take Precautions Against The Spread Of Influenza? A Data Science Approach To Latent Modeling Of Compliance With Preventative Practice, William L. Romine, Tanvi Banerjee, William R. Folk, Lloyd H. Barrow

Kno.e.sis Publications

– This study focuses on a central question: What key behavioral factors influence high school students’ compliance with preventative measures against the transmission of influenza? We use multilevel logistic regression to equate logit measures for eight precautions to students’ latent compliance levels on a common scale. Using linear regression, we explore the efficacy of knowledge of influenza, affective perceptions about influenza and its prevention, prior illness, and gender in predicting compliance. Hand washing and respiratory etiquette are the easiest precautions for students, and hand sanitizer use and keeping the hands away from the face are the most difficult. Perceptions of …


Management Of Sclerotium Rolfssi Through Methanolic Leaf Extract Of Alstonia Scholaris (L.) R. Br. And Azadirachta Indica L., Beenish Zia Butt, Nighat Sana, Saba Butt Jun 2016

Management Of Sclerotium Rolfssi Through Methanolic Leaf Extract Of Alstonia Scholaris (L.) R. Br. And Azadirachta Indica L., Beenish Zia Butt, Nighat Sana, Saba Butt

Journal of Bioresource Management

Sclerotium rolfsii is a polyphagous soil borne fungus infecting more than 500 plant species across the world that is causing vast losses. Although the fungus is soil and seed borne, soil borne inoculum is most vital in infection-causing and syndrome development. Treating soil borne pathogens with fungicides is not reasonable due to very high costs. Environmental hazards are also involved. Therefore, integrated management of pathogens using biological controlling agents is the paramount alternative. Extracts of higher plants have demonstrated a wide range of activity against plant pathogenic organisms. The present research work was carried out to manage the pathogen and …


Microwave Assisted Extraction Of Phenolics From Trachyspermum Ammi (L.) Sprague, Sumera Javad, Maimoona Mubarik, Arusa Aftab, Amina Tariq Jun 2016

Microwave Assisted Extraction Of Phenolics From Trachyspermum Ammi (L.) Sprague, Sumera Javad, Maimoona Mubarik, Arusa Aftab, Amina Tariq

Journal of Bioresource Management

Trachyspermum ammi (L.) Sprague is an annual herbaceous plant belonging to the family Apiaceae and is mostly administered for stomach disorders. During the present research work, cold maceration and Microwave Assisted Extraction (MAE) of T. ammi Sprague was done by using methanol, dichloromethane and n-hexane separately as extracting solvents. For cold maceration, 2, 4, 6, 18 and 24 hours of time durations were used for each solvent. Maximum extract (50mg/g) was obtained at 18 hours of cold maceration with methanol, while maximum phenolics were also obtained from the same extract, which were calculated to be 170.89μg/g equivalent of Gallic acid. …


Ethnoecological Studies Of Herbs And Shrubs Of Miani Sahib Graveyard, Lahore City, Punjab, Pakistan, Anis Ali Shah, Zaheer -Ud-Din Khan, Musarrat Ramzan, Rabia Saba Jun 2016

Ethnoecological Studies Of Herbs And Shrubs Of Miani Sahib Graveyard, Lahore City, Punjab, Pakistan, Anis Ali Shah, Zaheer -Ud-Din Khan, Musarrat Ramzan, Rabia Saba

Journal of Bioresource Management

This survey was carried out to prepare a plant inventory for the exploration of the ethnobotanical importance of the plants in the Miani Sahib Graveyard and to understand the effectiveness of graveyards in conserving plant diversity. Plants were collected in different seasons of the year and were dried, pressed, mounted and identified with the help of Flora of Pakistan. Our ethnobotanical study was carried out by interviewing the herbal drug dealers, timber dealers, fuel wood sellers, and the local elderly people residing in the adjacent areas of Miani Sahib and hakims through a questionnaire. Cyperaceae was noticed as the dominant …


Effect Of Different Plant Extracts On Termite Species (Heterotermis Indicola), Nazeer Ahmed, Zelle Huma, Misbah Ul Haq, Saif -Ur- Rehman, Misbah Ullah, Saeed Ahmed Jun 2016

Effect Of Different Plant Extracts On Termite Species (Heterotermis Indicola), Nazeer Ahmed, Zelle Huma, Misbah Ul Haq, Saif -Ur- Rehman, Misbah Ullah, Saeed Ahmed

Journal of Bioresource Management

This study was carried out to find the effect of some commonly present plant products on termite species (Heterotermis indicola) which are a major threat worldwide. Three different concentrations (20%, 10%, 5%) of various solutions consisting of garlic, Neem and tobacco was used in hot and cold water. Hot and cold water results showed that a high concentration treatment of the garlic (20%) solution caused 100% mortality after 48 hours, but in the case of the tobacco concentration (20%) of the solution in only cold water resulted in 100% mortality. As the concentration become lower, the efficiency becomes …


Effect Of Canopy Cover Of Capparis Decidua Forsk. On Soil Conditions In Thal Desert, Ghulam Yasin, Muhammad Farrakh Nawaz, Faiz Rasool, Muhammad Talha Bin Yousuf, Muhammad Qaisar Nazir, Atif Javed Jun 2016

Effect Of Canopy Cover Of Capparis Decidua Forsk. On Soil Conditions In Thal Desert, Ghulam Yasin, Muhammad Farrakh Nawaz, Faiz Rasool, Muhammad Talha Bin Yousuf, Muhammad Qaisar Nazir, Atif Javed

Journal of Bioresource Management

Desert shrubs have a deep root system which allows them to explore the soil minerals and moisture from deeper horizons of soil and strongly support the local dwellers’ livelihoods. Capparis decidua (Forsk.) Edgew, generally known as karir, a xerophytic, densely branched shrub, is widely found in arid and semi-arid areas of Pakistan. The present study was conducted at four different sites in the Thal desert to determine the canopy effect of C. decidua on soil nutrients. Soil nutrients under the plant canopy (UC), at a distance of 150 cm away from the canopy (D150) and 300 cm away from the …


Evaluation Of Diver® Concentration Against Cotton Mealybug, Phenacoccus Solenopsis (Hemiptera: Pseudococcidae) And Its Parasitoid, Aenasius Bambawalei (Hymenoptera: Encyrtidae) In Laboratory, Muhammad Arfat Ashraf, Saif -Ur- Rehman, Nazeer Ahmed, Muhammad Salman Hameed, Saeed Ahmed, Zelle Huma Jun 2016

Evaluation Of Diver® Concentration Against Cotton Mealybug, Phenacoccus Solenopsis (Hemiptera: Pseudococcidae) And Its Parasitoid, Aenasius Bambawalei (Hymenoptera: Encyrtidae) In Laboratory, Muhammad Arfat Ashraf, Saif -Ur- Rehman, Nazeer Ahmed, Muhammad Salman Hameed, Saeed Ahmed, Zelle Huma

Journal of Bioresource Management

Bio-assay of Diver® for mealy-bug and its parasitoid, A. bambawalei, was carried out during 2010-2011 in the IPM Laboratory, Department of Agri. Entomology, University of Agriculture, Faisalabad. All the concentrations of Diver®, which were applied in laboratory conditions, were effective against mealy-bug. Diver® is the best mineral oil to control mealy-bug when compared to other synthetic pesticides. On the numerical basis of data, which were recorded on mortality basis, the highest concentration of Diver® was most effective against mealy-bug, followed by the other concentrations. All the concentrations of Diver® on the parasitoid of mealy-bug swerve less and their effects …


Impact Of Pre-Emergence Herbicides For The Control Of Weeds In Chick Pea (Cicer Arietinum L.) Under Hot Arid Climate, Ghulam Abbas, Aziz Ahmed, Marghub Amer, Zafar Abbas, Mudassir -Ur- Rehman, Aamir Hussain, Ghulam Abbas Khan Jun 2016

Impact Of Pre-Emergence Herbicides For The Control Of Weeds In Chick Pea (Cicer Arietinum L.) Under Hot Arid Climate, Ghulam Abbas, Aziz Ahmed, Marghub Amer, Zafar Abbas, Mudassir -Ur- Rehman, Aamir Hussain, Ghulam Abbas Khan

Journal of Bioresource Management

The experiments were conducted at Adaptive Research Farm Karor Lal Eason and farmers’ field, i.e. Mouza Nawan Kot, Tehsil Choubara during Rabi 2014-15. The purpose of the experiment was to evaluate the effect of different herbicides for the control of weeds on chick pea.Two pre-emergence herbicides with two different doses, viz. Pendimethalin330 EC @ 2500 ml ha-1 before sowing, Pendimethalin330 EC @ 3750 ml ha-1before sowing, Top Max 90% EC. (Metachlor 83% + Pendimethalin13%) @ 2250 ml ha-1 before sowing and TopMax 96% (Metachlor83% + 13%)@ 3350 ml ha-1, were tested. An untreated plot was also included in the experiment. …


Germline Defects Caused By Smed-Boule Rna-Interference Reveal That Egg Capsule Deposition Occurs Independently Of Fertilization, Ovulation, Mating, Or The Presence Of Gametes In Planarian Flatworms, Jessica Kathryne Steiner, Junichi Tasaki, Labib Rouhana May 2016

Germline Defects Caused By Smed-Boule Rna-Interference Reveal That Egg Capsule Deposition Occurs Independently Of Fertilization, Ovulation, Mating, Or The Presence Of Gametes In Planarian Flatworms, Jessica Kathryne Steiner, Junichi Tasaki, Labib Rouhana

Biological Sciences Faculty Publications

Few animals are known to lay eggs in the absence of ovulation or copulation, as it is presumably energetically wasteful and subjected to negative selection. Characterization of Smed-boule, a member of the DAZ family of germline RNA-binding proteins, revealed that egg capsule (or capsule) production and deposition occurs independently of the presence of gametes in the planarian flatworm Schmidtea mediterranea. Reduction of Smed-boule expression by RNA-interference (RNAi) causes ablation of spermatogonial stem cells and the inability of ovarian germline stem cells to undergo oogenesis. Although animals subjected to Smed-boule RNAi lose their gametes and become sterile, they continue …


The End-Cretaceous Mass Extinction And The Chicxulub Impact, Rebecca Teed May 2016

The End-Cretaceous Mass Extinction And The Chicxulub Impact, Rebecca Teed

Earth and Environmental Sciences Faculty Publications

This handout focuses on the evidence for the theory that a massive meteor impact off the coast of Mexico caused the mass extinction at the end of the Cretaceous Period. The dinosaurs and about 75% of all marine invertebrate species and many other organisms died abruptly at this time. It is part of a set of four articles on possible causes of the Permian and Cretaceous mass extinctions that can be used to organize classroom debates or to have students compare and contrast the events and their causes.


The End-Permian Mass Extinction And A Possible Massive Impact, Rebecca Teed May 2016

The End-Permian Mass Extinction And A Possible Massive Impact, Rebecca Teed

Earth and Environmental Sciences Faculty Publications

This handout examines the evidence for the theory that a massive meteor impact caused the mass extinction at the end of the Permian Period. This is the worst mass extinction known to geologists, and 90% or more of all species on Earth were wiped out. It is part of a set of four articles on possible causes of the Permian and Cretaceous mass extinctions that can be used to organize classroom debates or to have students compare and contrast the events and their causes.


The End-Cretaceous Mass Extinction And The Deccan Traps Eruptions, Rebecca Teed May 2016

The End-Cretaceous Mass Extinction And The Deccan Traps Eruptions, Rebecca Teed

Earth and Environmental Sciences Faculty Publications

This handout focuses on the evidence for the theory that a series of flood-basalt eruptions in northern India caused the mass extinction at the end of the Cretaceous Period. The dinosaurs and about 75% of all marine invertebrate species and many other organisms died abruptly at this time. This is one of a set of four articles on possible causes of the Permian and Cretaceous mass extinctions that can be used to organize classroom debates or to have students compare and contrast the events and their causes.


The End-Permian Mass Extinction And The Siberian Traps Eruptions, Rebecca Teed May 2016

The End-Permian Mass Extinction And The Siberian Traps Eruptions, Rebecca Teed

Earth and Environmental Sciences Faculty Publications

This handout focuses on the evidence for the theory that a series of flood-basalt eruptions in Siberia caused the mass extinction at the end of the Permian Period. This is the worst mass extinction known to geologists, and 90% or more of all species on Earth were wiped out. It is part of a set of four articles on possible causes of the Permian and Cretaceous mass extinctions that can be used to organize classroom debates or to have students compare and contrast the events and their causes.


Mycodb, A Global Database Of Plant Response To Mycorrhizal Fungi, V. Bala Chaudhary, Megan A. Rúa, Anita Antoninka, James D. Bever, Jeffery Cannon, Ashley Craig, Jessica Duchicela, Alicia Frame, Catherine Gehring, Michelle Ha, Miranda Hart, Jacob Hopkins, Baoming Ji, Nancy C. Johnson, Wittaya Kaonongbua, Justine Karst, Roger T. Koide, Louis J. Lamit, James Meadow, Brook Milligan, John C. Moore, Thomas H. Pendergast Iv, Bridget J. Piculell, Blake Ramsby, Suzanne Simard, Shubha Shrestha, James Umbanhowar, Wolfgang Viechtbauer, Lawrence Walters, Gail W. T. Wilson, Peter C. Zee, Jason D. Hoeksema May 2016

Mycodb, A Global Database Of Plant Response To Mycorrhizal Fungi, V. Bala Chaudhary, Megan A. Rúa, Anita Antoninka, James D. Bever, Jeffery Cannon, Ashley Craig, Jessica Duchicela, Alicia Frame, Catherine Gehring, Michelle Ha, Miranda Hart, Jacob Hopkins, Baoming Ji, Nancy C. Johnson, Wittaya Kaonongbua, Justine Karst, Roger T. Koide, Louis J. Lamit, James Meadow, Brook Milligan, John C. Moore, Thomas H. Pendergast Iv, Bridget J. Piculell, Blake Ramsby, Suzanne Simard, Shubha Shrestha, James Umbanhowar, Wolfgang Viechtbauer, Lawrence Walters, Gail W. T. Wilson, Peter C. Zee, Jason D. Hoeksema

Biological Sciences Faculty Publications

Plants form belowground associations with mycorrhizal fungi in one of the most common symbioses on Earth. However, few large-scale generalizations exist for the structure and function of mycorrhizal symbioses, as the nature of this relationship varies from mutualistic to parasitic and is largely context-dependent. We announce the public release of MycoDB, a database of 4,010 studies (from 438 unique publications) to aid in multi-factor meta-analyses elucidating the ecological and evolutionary context in which mycorrhizal fungi alter plant productivity. Over 10 years with nearly 80 collaborators, we compiled data on the response of plant biomass to mycorrhizal fungal inoculation, including meta-analysis …


Association Of Rs2476601 And Rs1544410 With Onset Of T1d In Youngsters Of Lahore, Pakistan, Andleeb Batool, Maryam Mukhtar, Iram Qayyum, Romessa Shakeel May 2016

Association Of Rs2476601 And Rs1544410 With Onset Of T1d In Youngsters Of Lahore, Pakistan, Andleeb Batool, Maryam Mukhtar, Iram Qayyum, Romessa Shakeel

Journal of Bioresource Management

The PTPN22 gene plays vital role in T1D onset by encoding Lymphoid-specific phosphatase (LYP) that lead to T-cell receptor-associated CsK kinase inactivation and preventing T-cell spontaneous activation by dephosphorylation. VDR gene encoded for VDR receptor is involved indirectly in prevention of T1D onset by promoting insulin production. The present study was conducted to determine the mutations on rs2476601 and rs1544410 polymorphic sites on the PTPN22 and VDR genes respectively. We genotyped 50 patients and 50 control subjects from Lahore by using sequencing and Polymerase Chain Reaction-Restriction Fragment Length Polymorphism (RFLP) techniques. It was observed that the allelic frequency of r …


Influence Of Row Spacing And Frequency Of Cuttings On Spinach (Spinacia Oleracea) Production, Daud Ahmad Awan, Faheem Ahmad, Madeeha Imdad May 2016

Influence Of Row Spacing And Frequency Of Cuttings On Spinach (Spinacia Oleracea) Production, Daud Ahmad Awan, Faheem Ahmad, Madeeha Imdad

Journal of Bioresource Management

To study the effect of row spacing and frequency of cuttings on spinach (Spinacia oleracea), an experiment was carried out at the Kitchen Gardening Training Center for Women at 61 JB Dharorh Faisalabad, Pakistan, during 2014. The experiment was laid out in Randomized Complete Block Design (RCBD) with factorial arrangements having three replications with a plot size of 3 m × 6 m. This experiment was comprised of two factors, i.e. row spacing (Broadcast, 30 cm apart rows and 45 cm apart rows) and cutting frequency (45 days after sowing and 30 after the first cutting). The result …


In Silico Mechanistic Study Of Abscisic Acid (Aba) Mediated Drought Tolerance In Crops, Bushra Shaheen, Tayyaba Shaheen, Shahid Ur Rehman, Mahmood Ur Rahman, Muhammad Nawaz, Muhammad Tahir Ul Qamar May 2016

In Silico Mechanistic Study Of Abscisic Acid (Aba) Mediated Drought Tolerance In Crops, Bushra Shaheen, Tayyaba Shaheen, Shahid Ur Rehman, Mahmood Ur Rahman, Muhammad Nawaz, Muhammad Tahir Ul Qamar

Journal of Bioresource Management

Drought is one of the major environmental stresses that produces adverse effects on plants. Vast areas of agricultural land is susceptible to drought. Drought induced yield loss of crops has negative effects on the economy of a country. Among phytohormones, Abscisic Acid (ABA) induces abiotic stress tolerance in plants, and directs a complex regulatory network involving multiple transporters, up-regulation of ABA biosynthesis genes and various signalling pathways that enable plants to withstand low water availability. The current study was designed to understand ABA synthesis, its transport across the plant during stress and its mechanism to induce stomatal closure by using …


Phylogenetic Analysis Of Capra Hircus Commonly Found Goat Breeds Of Pakistan Using Dna Barcode, Asif Ali, Attika Rehman, Kainaat William May 2016

Phylogenetic Analysis Of Capra Hircus Commonly Found Goat Breeds Of Pakistan Using Dna Barcode, Asif Ali, Attika Rehman, Kainaat William

Journal of Bioresource Management

Cytochrome c oxidase subunit I or COI in the mitochondrial genome (DNA Barcode) of goats was used to identify and differentiate two common breeds (beetal and berberi) and crossbreeds sampled in Punjab, Pakistan. This is the first study on the molecular taxonomy of the goat breeds of Pakistan. Sequencing of DNA barcode of the beetal goat showed a 99% similarity to Capra hircus isolate LS16 cytochrome c oxidase subunit 1 (CO1) gene. Beriberi goats showed a 99% similarity to Capra hircus breed Jining Qing goat mitochondrion. Identification of goat breeds via DNA barcoding may help in local genetic improvement and …