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Diurnal Variation In Co2 Efflux By Pine Seedlings And Root-Associated Mycorrhizal Fungi, Richard Easterling

Honors Theses

This project was part of a larger experiment conducted by Amber Horning and Jason Hoeksema in the Department of Biology at the University of Mississippi, which was set up to investigate variation (over time, and with different light levels) in resource exchange between pine seedlings and two different species of ectomycorrhizal (EM) fungi. The experiment was conducted in a growth chamber, with mycorrhizal pine seedlings growing in plexiglass "mycocosms." I worked with two EM fungal species (Rhizopogon roseolus and Pisolithus arhizus, hereafter "Rhizopogon" and "Pisolithus"), which were collected locally near Oxford, Mississippi under loblolly pine. I selected a subset of …

Analysis Of Septum Defects In Arabidopsis Organ Boundary Mutants, Katherine T. Anderson

Honors Theses

Arabidopsis thaliana, a model plant species, has been heavily studied to determine the genetic contributions that lead to gynoecium development. The Arabidopsis fruit is created from two carpels that form a gynoecium, which contains the stigma, style, and ovary. The ovary is divided into two sub-compartments by a septum, and the ovules develop within the ovary. The fruit’s purpose is to protect, nurture, and eventually disperse the mature ovules, or seeds, and if the septum does not fuse properly, the plant’s fertility will be impacted. SHOOT MERISTEMLESS (STM) and ARABIDOPSIS THALIANA HOMEOBOX GENE1 (ATH1) are two genes that are known …

Auditory Radiation And Cognitive Decline: Probabilistic Tractography Study, Adryanna Tucker

Honors Theses

The relationship between hearing loss and Alzheimer’s disease has been studied for many years. Previous studies have shown a negative correlation between the two. In our study, we investigated the relationship between the strength of the auditory radiation connections and the severity of cognitive decline. To do so, we assessed probabilistic tractography using DTI data of the primary auditory pathway. Further, we assessed the level of cognition using the Alzheimer's Disease Assessment Scale-Cog to determine the relationship between the auditory connections assessed in each patient and that patient’s level of cognitive decline. We found that FA and AD were positively …

An Investigation Of Possible Reservoirs Of Lymphoproliferative Disease Virus Of Turkeys In Mississippi, Walker Hyche

Honors Theses

Emerging infectious diseases are a problem among wildlife and domestic populations. It is critical for these diseases to be studied. Lymphoproliferative disease virus is a retrovirus affecting turkeys and chickens. Prior research originally identified the virus in the United Kingdom and Israel. The first case of LPDV in the United States was found in 2009 in Arkansas. This study tests different reservoirs for the virus. DNA was extracted from samples of different origins and preservation types. Through PCR and gel electrophoresis analysis, different sample types from turkey populations were tested for LPDV. This study provides a method for submitting blood …

Effects Of Mycoplasma Gallisepticum On Experimentally Infected Eastern Bluebirds (Sialia Sialis), Meredith A. Fry

Honors Theses

The bacterium Mycoplasma gallisepticum is an avian respiratory pathogen that causes inflammation and swelling of conjunctiva in domestic poultry and wild finches. In the past, severity of conjunctivitis symptoms has been used to quantify infection severity and host resistance. However, many songbirds function as hosts to M. gallisepticum but do not develop this symptom at all. The absence of conjunctivitis, as well as other clinical signs, hinders our understanding of M. gallisepticum infection in the songbird community because some species are responding very differently than others. One such species is the Eastern Bluebird (Sialia sialis), a common songbird of the …

Histone Deacetylase Inhibitors And Breast Cancer Metastasis: A Review And Exploration Of Hdac(I)S And Other Chemotherapeutic Agents, William E. Sistrunk

Honors Theses

The traditional perspective of Histone Deacetylase enzymes is focused on their inherent epigenetic modification characteristics. While it is true that the histone modification these enzymes exhibit play a role in cancer and related diseases, Histone Deacetylase has a variety of non-histone targets. The non-histone targets include microtubules and are of specific interest because of the microtubules’ role in cell line differentiation, replication, apoptosis, and cancer metastasis. Using a variety of Histone Deacetylase Inhibitors (HDACi) and other chemotherapeutic compounds, our research group explored the HDACi effect on breast cancer cell lines. Our goal was to indicate the presence of HDACi cell-line …

Screening For Mental Health Concerns Across Pregnancy : Factors Associated With Depression And Anxiety Symptons In A Large Obgyn Clinic, Addie Keller

Honors Theses

Depression and anxiety are prevalent among pregnant women, however, mental health continues to be a portion of care neglected in the obstetric setting. Depression is of-ten thought of as a disorder that leads to a persistent feeling of sadness. Anxiety is charac-terized by excessive fear and worry. Because of the many changes occurring throughout pregnancy, both physically and emotionally, it is not uncommon for pregnant women to struggle with depression, anxiety, or both. Previous studies have found that there are many factors associated with depression and anxiety throughout pregnancy. This study focuses on the relationship between age, gravida, and social …

Effects Of The Pathogen Mycoplasma Gallisepticum Transmission On Growth And Condition Of Eastern Bluebirds Nestlings (Sialia Sialis), Gurshan Kaur

Honors Theses

A critical aspect to understanding disease dynamics is to understand how transmission occurs between hosts. There are two basic modes of transmission: vertical and horizontal. Vertical transmission is the passage of a pathogen from mother to offspring before or during birth, whereas horizontal transmission occurs between an infected host to a susceptible host. Mycoplasma gallisepticum (MG) is a common bacterial pathogen of poultry that causes respiratory disease. Infection of MG often results in weight loss, slowed growth rate, and increased mortality. Both vertical and horizontal transmission of MG have been found to occur in poultry. In the mid-90s, MG underwent …

The Effect Of Simulated Storm Passage On The Behavior Of Whitespotted Bamboo Sharks, Chiloscyllium Plagiosum And Golden Shiners, Notemigonus Chrysoleucas, Jordan A. Healy

Honors Theses

Environmental changes during a storm can affect animal behavior; for example, tagged sharks leave shallow waters during tropical storms. While changes in shark behavior during storm passage have been documented, there have been no experimental tests to determine which environmental parameters are responsible. In this study, we experimentally manipulated two environmental cues: barometric pressure, and thunder sounds, to determine their effect on whitespotted bamboo sharks, Chiloscyllium plagiosum, and golden shiners, Notemigonus crysoleucas. Elasmobranchs do not have a swim bladder to detect pressure change; therefore, we used golden shiners to compare the reaction of a fish with a swim bladder. The …

O-Glcnacylation Of Hif-1Α Protein In Human Breast Cancer Cells, Joshua D. Dolsen

Honors Theses

Cancer is an insidious disease that, if not caught in time, can cause devastating effects on the human body, especially if it metastasizes. It is important to note that each cancer behaves and develops differently based on its location in the body and the cellular characteristics constitute the instance of the disease. However, the development of cancer can universally be characterized by the acquisition of different hallmark abilities that promote disease progression. Proteins known as hypoxia-inducible factors (HIFs) can influence progression through these hallmarks, but primarily provides cancer cells with the ability to alter its metabolism to survive and further …

Studies On Luminescent Gold And Platinum Nanoclusters For Biological Sensing And Catalysis, Richard Covington

Honors Theses

Nanoclusters are small nanoparticles that usually range around a micrometer in diameter. Gold Nanoclusters are known for their unique size and surface qualities and do not share metallic properties with nanoparticles or their respective bulk material. Some metal nanoclusters show high fluorescence and can be synthesized with protein mediation. Nanocluster formation depends on a number of variables, including temperature, pH, and type of reducing agent. This experiment was done to begin to understand how these variables may affect synthesis and what exactly they are. Pure Wild Type CSP-1 protein was induced, transformed, and purified in order to mediate gold and …

Neuroprotection With Novel Anti-Oxidant And Cannabinoid-Based Small Molecules, Jacqueline R. Mcgrath

Honors Theses

Neurodegenerative diseases are caused by various underlying mechanisms within the nervous system. Excitotoxicity is a hallmark of many neurodegenerative diseases, and is produced by over excitation of glutamate receptors on neurons, ultimately leading to cell death. Protein aggregates and oxidative stress have also induced neuronal cell death that lead to many neurodegenerative diseases as well. Many compounds isolated from plants have shown protective ability against these underlying toxicity mechanisms. In this study, we tested several cannabinoid and anthyocanin-based small molecules protective abilities against excitotoxicity. We found several compounds that protected against glutamate-induced excitotoxicity in a concentration-dependent manner. We also tested …

The Upright Go Wearable Posture Device: An Evaluation Of Postural Health, Improvement Of Posture, And Salivary Cortisol Fluctuations In College Students, Alexandra Lauren Elliott

Honors Theses

Health professionals consider improper posture as a risk factor for musculoskeletal disorders, chronic pain, and additional health issues. The chief aim of my study was to investigate links between poor posture and health, particularly in college students. To collect data regarding postural health, I distributed an exploratory survey to Human Anatomy and Physiology II (BISC 207) students at the University of Mississippi in Spring 2018. Students reported significant concern with quality of personal posture and significant experience with negative side effects of poor posture. Results demonstrated a need for postural education, leading to phase 2 of my experiment, the evaluation …

Bacteria In Salt Pans Along The Mississippi Gulf Coast, Lauren A. Lawson

Honors Theses

Salt pans form in shallow depressions in the ground where salt water evaporates leaving a hypersaline environment remaining. These pans become flooded during extremely high tides and as time progresses, this additional salt water is evaporated leaving behind more salt deposits. Marine salt pans can provide habitat for halophilic microorganisms and provide an interesting environment for study as conditions can change with both sediment and water depth. Towards the surface of sediment in salt pans, oxygen is still available, however, deeper sediments have limited oxygen availability and are likely anaerobic. Deeper sediments can also have higher salt concentrations so may …

When Life Gives You Lemons: Comparing Two Diffusion Methods For A Psychological Screening Tool In The Medical Field, Jessica Tran

Honors Theses

E.M. Rogers’ Diffusion of Innovation Theory is used to explain the process of how an idea or technology gains momentum and spreads through a particular population. The result of the diffusion is called adoption, meaning that over time the group has changed their initial behavior (i.e. using the new technology, purchasing and performing new behavior, etc.). There is considerable evidence for successful use of this theory in various fields. The study investigates the theory using a new psychological screening technology. A solicitation to hear information about the tool was presented to 19 physicians who were separated into two randomized groups, …

Interactions Of Fentanyl With Gp120 In The Central Nervous System, Meagan Buchanan

Honors Theses

The Human Immunodeficiency Virus (HIV) has affected more than 75 million individuals worldwide. HIV not only affects the peripheral system through the targeting of T cells, but also causes adverse effects in the central nervous system. Individuals suffering from HIV often experience neuropathic pain and are prescribed opioids to combat the chronic pain. Along with the increase of opioids prescribed to HIV patients, the number of deaths related to the synthetic opioid, fentanyl, has increased drastically. Drug abuse and HIV are interlinked epidemics; individuals who are HIV positive and referred to as “NeuroAIDS.” The HIV envelope protein, gp120, has been …

Yield Stress Analysis With Dv-Iii Rheometer, Leah Margaret Cook

Honors Theses

The purpose of this thesis is to understand the behavior of everyday substances (toothpaste, lotions, ect.) and chemicals through the analysis of yield stress. By measuring the flow properties of these products, one can determine the stability, uses, and other properties of a substance. Yield stress is experienced everyday from squeezing a tube of toothpaste, to stirring a batch of cake batter, or canning products in a factory. Yield stress along with viscosity helps us predict the behavior of chemicals, cosmetics, and food that we handle daily. Yield stress, torque, and strain values were measured with a DV-III Rheometer and …

Deducing The Reproductive, Behavioral, And Learning Effects Of Developmental Cannabinoid Exposure In Zebrafish, Marisa L. Kutchma

Honors Theses

With the spreading legalization of marijuana, it is important to investigate the effects of two of its active ingredients—Δ9-tetrahydrocannabinol (THC) and cannabidiol (CBD). THC and CBD differ in that THC exerts psychoactive effects, while CBD does not. Thus, CBD is renowned for its analgesic effects in treating a variety of ailments, for example, childhood drug-resistant epilepsy. In addition, there is an increase in reports of prenatal CBD usage. As it is increasingly used, research has fallen far behind the proliferation of CBD and more needs to be done, particularly in the developmental realm. This study utilizes a developmental origins of …

Time Course Effects Of Repetitive Social Defeat Stress On A Prefrontal Cortex-Dependent Cognitive Flexibility Task, Shaffer Hannah

Honors Theses

Stress is known to change the structure and function of the brain in animals and humans as well as their behavior. It has a high correlation with the development of psychiatric disorders as well. We looked to investigate how repetitive intermittent social defeat stress using the resident-intruder paradigm in rats affected a cognitive flexibility task. The task used was a set-shifting protocol known to be associated with the function of the prefrontal cortex. Measurements on the task were taken intermittently between social stress sessions to determine short-term effects and 10 days after the last social stress session to measure long …

Resting State Fmri Study Of The Olfactory Region In Autism, Madlyn Lawrence

Honors Theses

This thesis was conducted to further the investigation of the Olfactory system of a typically developing individual compared to an individual with Autism. The Olfactory system is unique in that it is the only sensory system that is not relayed through the thalamus in the brain. Autism Spectrum Disorder (ASD), also known as Autism, is a developmental disorder which impairs a person's social, behavioral, developmental, cognitive and psychological aspects. Autism Spectrum Disorder can present with symptoms such as difficulty communicating, difficulty with social interactions obsessive thoughts and compulsions and repetitive behaviors. Subjects with Autism Spectrum Disorder present with an inability …

Microbial Communities Associated With Dragonfly Nymphs Raised In Varying Concentrations Of Amoxicillin, Michelle Basha

Honors Theses

The bacteria on and within an organism make up that organism’s microbiome. Given interest in the use of antibiotics in agriculture and the effect of microbes on human health, more studies are needed on the microbial community composition of different organisms and how it responds to antibiotic use. This study investigated changes in the amount of antibiotic resistant bacteria present in dragonfly nymphs exposed to differing concentrations of amoxicillin. Next generation sequencing of the 16S rRNA gene was used to identify cultures of these antibiotic resistant bacteria. Increasing the concentration of antibiotics the dragonfly nymphs were exposed to resulted in …

Time- And Ph- Dependent Proteolysis Of Engineered Proteins By Collagenase, Hunter Berry

Honors Theses

Pleiotropic effects from oral administration of anti-inflammatory drugs limit their effectiveness. The ultimate goal of this project is to develop a novel self-assembling protein-based hydrogel for in situ delivery of NSAIDs at the site of chronic inflammation. Since inflammation causes acidification and activation of collagenases in the inflamed tissue, we have designed the hydrogel to respond to both of these queues to effectively deliver drug at the site. Self-assembly of the protein hydrogel exploits the high affinity and specific interaction between the protein calmodulin (CaM) and its specific binding peptide, M13. The two components of the hydrogel, CCLP and PCLP …

Exploration Of Thiol-Michael Addition Bioconjugation To Extend Polymers Of A Protein-Based Hydrogel, Elaine Wallin Smith

Honors Theses

Hydrogels have been explored for many biomedical applications, including targeted, in situ drug delivery to avoid the negative side effects associated with systemic delivery. In our work, we are exploiting the high affinity, calcium-dependent binding between calmodulin and its target peptides to create a biomaterial for in situ, extracellular drug delivery. Genes were engineered to make two protomers, Calmodulin Collagen-Like Protein (CCLP) and Peptide Collagen-Like Protein (PCLP), that will spontaneously self-assemble in situ due to the high Ca2+ concentration in the extracellular space and provide tunable, targeted drug delivery in a biocompatible hydrogel. One important factor that would dictate the …

Diversification In The Neotropics – Evolution And Population Genetics Of The Armored Catfish Hypancistrus Sp. From The Xingu River, Marcella Goncalves Santos

Electronic Theses and Dissertations

The Xingu River, one of the largest tributaries of the Amazon River, is currently in peril due to the recent construction of hydroelectric dams, but little is known about the numerous fish species it supports. This dissertation focuses on three pleco catfish species belonging to the genus Hypancistrus from the Xingu River with partially overlapping distributions: H. zebra, H. sp. (L174), and H. sp. (L66/333). Chapter 1 is a bibliographic review of Amazonian freshwater fish diversity, with the goal of discussing the hypotheses of speciation mechanisms that can be tested in this system, including the relative importance of ecological adaptation …

Child Nutrition Program Managers’ Evaluation Of The Mississippi Recipes For Success (Mrs) Guide, Alexandra Hallmark

Electronic Theses and Dissertations

Findings from this study can assist MDE-OCN in future updates of the MRS Guide. MRS is an excellent resource for CNP professionals and can be used by other state child nutrition programs as a guide when developing or updating their own menu planning tools and training resources. The Mississippi Department of Education Office of Child Nutrition (MDE OCN) has been assisting child nutrition programs with meeting the nutritional needs of the students since 2000. The Mississippi Recipes for Success (MRS) guide is the latest recipe database developed and updated by MDE-OCN. This guide contains a database that is comprised of …

The Independent And Combined Effects Of Hypoxia And Tributyltin On The Eastern Oyster, Crassostrea Virginica, Ann Fairly Barnett

Electronic Theses and Dissertations

Oysters are vital to the health of estuarine ecosystems and provide critical ecosystem services, such as water quality improvement, nursery habitat for commercially important fisheries, and shoreline stabilization. Despite their ecological and economic importance, oyster reefs are exposed to many stressors, and oyster populations in Mississippi have declined dramatically in recent years. The present study focuses on the effects of hypoxia and tributyltin (TBT) on the Eastern oyster, Crassostrea virginica. Hypoxic events are increasingly comin coastal ecosystems worldwide, and TBT is a legacy toxicant once used as an antifoulant. The effects of these stressors were assessed on adult oysters deployed …

The Evolution Of Coral Snake Mimicry, Renan Janke Bosque

Electronic Theses and Dissertations

Scientists have regarded mimicry as one of the most amazing examples of the power of natural selection. Early observations by naturalists of the mimetic association between venomous New World coral snakes of the genus Micrurus and harmless mimics has stimulated an intense debate about the causes and consequences of mimicry that persists today. Despite its medical, evolutionary and historical importance our understanding of evolution within the genus Micrurus is negligible. My dissertation explores the evolution of mimicry within South American coral snakes and their mimics using a multi-scale framework involving macroevolutionary (Chapter I), geographic/morphological concordance (Chapters II and III), behavioral …

Do Individual Responses To Resistance Exercise Exist To An Extent That Can Be Detected Beyond That Of Measurement Error/Random Biological Variability?, Scott J. Dankel

Electronic Theses and Dissertations

Millions of dollars are spent analyzing inter-individual differences in response to resistance exercise, but the lack of a non-exercise control group means they may simply be examining random error. The purpose of this study was to determine whether there are inter-individual differences in response to two distinct resistance exercise protocols. Participants (n=151) were randomly assigned to one of 3 groups as follows: (1) a traditional exercise group performing 4 sets to failure with a load that could be lifted 8-12 times; (2) a one-repetition maximum (1RM) training group performing a 1RM test each visit; and (3) a non-exercise control group. …

A Sustainable Future In The Implementation Of Clinical Pharmacogenomics, Nicholas Keeling

Electronic Theses and Dissertations

Purpose: The sustainability of clinical pharmacogenomics requires further study of clinical education on the topic, its effects on clinical workflow, and the responsibilities of different providers for its delivery. Tools from the discipline of implementation science were utilized herein to help achieve the purposes of the three studies. The broad purpose of this dissertation is to advance the work of clinical pharmacogenomic implementation through a more rigorous convergence with implementation science.

Methods: Three studies constitute the whole of this dissertation. The first is a scoping review that provides a broad characterization of the methods utilized in available peer-revieliterature focusing on …

Effects Of Impoundments On The Community Assemblage And Gene Flow Of Stream Crayfishes, Zanethia Choice Barnett

Electronic Theses and Dissertations

Dams and their impoundments block movement of stream organism and change stream physiochemical properties, which subsequently changes biological assemblages and creates barriers to gene flow. While changes in species assemblages and gene flow have been assessed for numerous impoundments and stream organisms, no study has assessed the effects of large impoundments on crayfish assemblages and population genetic diversity and connectivity. I examined the physiochemical, biological, and genetic effects of impoundments on crayfishes. Between May 2015 and August 2017, I sampled multiple sites up- and downstream of three impounded streams, and along the lengths of two unimpounded streams, in the Bear …