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- 16S-23S ITS (2)
- Cyanobacteria (2)
- 16S rRNA gene (1)
- 16S-ITS-23 rDNA (1)
- Alkaloid sequestration (1)
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- Animal personality (1)
- Ata- cama Desert (1)
- Behavioral syndrome (1)
- Biological soil crusts; Coastal Sage Scrub (1)
- COVID-19 (1)
- Chaparral ecosystems (1)
- Chemical defense (1)
- Cis-195A (1)
- Cis-211A (1)
- Climate change (1)
- Cryptic genera (1)
- Cryptic species (1)
- Decahydroquinoline (1)
- Dendrobatidae (1)
- Deserts (1)
- Eastern Red-backed salamander (1)
- Edaphism (1)
- Exercise (1)
- Feeding experiment (1)
- Fire cycles (1)
- Fitness tracking (1)
- Foraging behavior (1)
- Genome mining (1)
- Global pandemic (1)
- Gypsophile (1)
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Articles 1 - 11 of 11
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Gypsum-Exclusive Plants Accumulate More Leaf S Than Non-Exclusive Species Both In And Off Gypsum, Andreu Cera, Gabriel Montserrat-Martí, Juan Pedro Ferrio, Rebecca E. Drenovsky, Sara Palacio
Gypsum-Exclusive Plants Accumulate More Leaf S Than Non-Exclusive Species Both In And Off Gypsum, Andreu Cera, Gabriel Montserrat-Martí, Juan Pedro Ferrio, Rebecca E. Drenovsky, Sara Palacio
2021 Faculty Bibliography
Gypsum-exclusive species (gypsophiles), are restricted to gypseous soils in natural environments. However, it is unclear why gypsophiles display greater affinity to gyspeous soils than other soils. These plants are edaphic endemics, growing in alkaline soils with high Ca and S. Gypsophiles tend to show higher foliar Ca and S, lower K and, sometimes, higher Mg than non-exclusive gypsum species, named gypsovags. Our aim was to test if the unique leaf elemental signature of gypsophiles could be the result of special nutritional requirements linked to their specificity to gypseous soils. These nutritional requirements could hamper the completion of their life cycle …
Impact Of Activity Monitoring On Physical Activity, Sedentary Behavior, And Body Weight During The Covid-19 Pandemic, Jacob E. Barkley, Gregory Farnell, Brianna Boyko, Brooke Turner, Ryan Wiet
Impact Of Activity Monitoring On Physical Activity, Sedentary Behavior, And Body Weight During The Covid-19 Pandemic, Jacob E. Barkley, Gregory Farnell, Brianna Boyko, Brooke Turner, Ryan Wiet
2021 Faculty Bibliography
Decreases in individuals' physical activity and increases in sedentary behavior and bodyweight have been reported during the COVID-19 pandemic. The present study assessed the ability of physical activity monitoring, which may promote physical activity and discourage sedentary behavior, to mitigate these negative outcomes. An evaluation of university samples ( N = 404, 40.5 ± 15.4 years) of self-reported physical activity, sedentary behavior, and bodyweight prior to the closure of campus due to the pandemic in March of 2020 and again at the time of the survey administration (May-June 2020) during pandemic-related restrictions was performed. Participants also reported whether they did …
Total Synthesis Of Decahydroquinoline Poison Frog Alkaloids Ent-Cis-195a And Cis-211a, Takuya Okada, Naizhen Wu, Katsuki Takashima, Jungoh Ishimura, Hiroyuki Morita, Takuya Ito, Takeshi Kodama, Yuhei Yamasaki, Shin-Ichi Akanuma, Yoshiyuki Kubo, Ken-Ichi Hosoya, Hiroshi Tsuneki, Tsutomu Wada, Toshiyasu Sasaoka, Takahiro Shimizu, Hideki Sakai, Linda P. Dwoskin, Syed R. Hussaini, Ralph Saporito, Naoki Toyooka
Total Synthesis Of Decahydroquinoline Poison Frog Alkaloids Ent-Cis-195a And Cis-211a, Takuya Okada, Naizhen Wu, Katsuki Takashima, Jungoh Ishimura, Hiroyuki Morita, Takuya Ito, Takeshi Kodama, Yuhei Yamasaki, Shin-Ichi Akanuma, Yoshiyuki Kubo, Ken-Ichi Hosoya, Hiroshi Tsuneki, Tsutomu Wada, Toshiyasu Sasaoka, Takahiro Shimizu, Hideki Sakai, Linda P. Dwoskin, Syed R. Hussaini, Ralph Saporito, Naoki Toyooka
2021 Faculty Bibliography
The total synthesis of two decahydroquinoline poison frog alkaloids ent-cis-195A and cis-211A were achieved in 16 steps (38% overall yield) and 19 steps (31% overall yield), respectively, starting from known compound 1. Both alkaloids were synthesized from the common key intermediate 11 in a divergent fashion, and the absolute stereochemistry of natural cis-211A was determined to be 2R, 4aR, 5R, 6S, and 8aS. Interestingly, the absolute configuration of the parent decahydroquinoline nuclei of cis-211A was the mirror image of that of cis-195A, although both alkaloids were isolated from the same poison frog species, Oophaga (Dendrobates) pumilio, from Panama.
Phylogenetic Placement Of Seven Strains Of Synechococcales (Cyanobacteria) Isolated From Desert Soils In Zion National Park., Kevin Houk
Senior Honors Projects
Seven strains of cyanobacteria of the order Synechococcales were isolated from the sandstone derived soil of Zion National Park. These strains were analyzed using 16S rRNA and 16S-23S phylogenetic analysis, percent dissimilarity of the ITS sequence, morphology, and the similarity of the 16S rRNA sequence. One strain was placed within the genus Plectolyngbya, but the Bayesian inference and 16S rRNA similarity analysis support the conclusion that Plectolyngbya should not considered a valid genus, and that it should be integrated into the taxonomically prioritized Leptolybya. Two of the strains were found to be similar to Phormidesmus morphologically, but the …
A New Species Of Cryptic Cyanobacteria Isolated From The Epidermis Of A Bottlenose Dolphin And As A Bioaerosol, Amber O. Brown, Caitlin S. Romanis, Petr Dvorak, Amanda J. Foss, Quincy A. Gibson, Chelsea D. Villaneuva, Wendy N. Durden, Anyssa D. Garvey, Phillip Jenkins, Petr Hasler, Jeffrey R. Johansen, Brett A. Neilan, Dale A. Casamatta
A New Species Of Cryptic Cyanobacteria Isolated From The Epidermis Of A Bottlenose Dolphin And As A Bioaerosol, Amber O. Brown, Caitlin S. Romanis, Petr Dvorak, Amanda J. Foss, Quincy A. Gibson, Chelsea D. Villaneuva, Wendy N. Durden, Anyssa D. Garvey, Phillip Jenkins, Petr Hasler, Jeffrey R. Johansen, Brett A. Neilan, Dale A. Casamatta
2021 Faculty Bibliography
No abstract provided.
Repeatability Of Foraging Behavior Following A Simulated Predation Attempt Depends On Color Morph, Sex, And Foraging Metric In Red-Backed Salamanders (Plethodon Cinereus), Brian P. Waldron*, Marissa C. Ganzfried*, Cari-Ann M. Hickerson, Carl D. Anthony
Repeatability Of Foraging Behavior Following A Simulated Predation Attempt Depends On Color Morph, Sex, And Foraging Metric In Red-Backed Salamanders (Plethodon Cinereus), Brian P. Waldron*, Marissa C. Ganzfried*, Cari-Ann M. Hickerson, Carl D. Anthony
2021 Faculty Bibliography
Behavioral repeatability greatly affects the capacity of an individual to respond to varying environments. When multiple behaviors within individuals are repeatable and correlated across time or across contexts, it is termed a behavioral syndrome. However, not all behaviors exhibit the same level of repeatability, and relatively few studies have examined repeatability in amphibians. We examined the repeatability of foraging behavior in the Eastern Red-backed salamander (Plethodon cinereus), a color-polymorphic terrestrial salamander, following a simulated predation attempt. We tested several hypotheses: (1) Simulated predation would negatively affect foraging, increasing latency to feed and decreasing the number of prey items eaten in …
New Piperidine Alkaloids From Fire Ants Are Not Sequestered By The Green And Black Poison Frog ( Dendrobates Auratus ), Ian Davison, Ralph Saporito, Lisa M. Shulte, Kyle Summers
New Piperidine Alkaloids From Fire Ants Are Not Sequestered By The Green And Black Poison Frog ( Dendrobates Auratus ), Ian Davison, Ralph Saporito, Lisa M. Shulte, Kyle Summers
2021 Faculty Bibliography
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Neotropical poison frogs possess alkaloid-based antipredator defenses which they sequester from a diet of arthropods such as oribatid mites and myrmicine ants. Alkaloid sequestration is still poorly understood and although several studies have examined its uptake, most experiments directly feed alkaloids to the frogs. Here, we examined the alkaloid uptake system in the poison frog species Dendrobates auratus by feeding it an alkaloid-containing prey item, the red imported fire ant Solenopsis invicta (Formicidae, Myrmicinae). Captive bred frogs were either fed live ants or fruit flies dusted with powdered ants for 4 months. Using GC–MS, we confirm that S. invicta contain …
When Will Taxonomic Saturation Be Achieved? A Case Study In Nunduva And Kyrtuthrix (Rivulariaceae, Cyanobacteria)1, Jeffrey R. Johansen, Laura Gonzalez-Resendiz, Viviana Escobar-Sanchez, Claudia Segal-Kischinevzky, Jose Martınez-Yerena, Joaquin Hernandez-Sanchez, Gariela Hernandez-Perez, Hilda Leon-Tejera
When Will Taxonomic Saturation Be Achieved? A Case Study In Nunduva And Kyrtuthrix (Rivulariaceae, Cyanobacteria)1, Jeffrey R. Johansen, Laura Gonzalez-Resendiz, Viviana Escobar-Sanchez, Claudia Segal-Kischinevzky, Jose Martınez-Yerena, Joaquin Hernandez-Sanchez, Gariela Hernandez-Perez, Hilda Leon-Tejera
2021 Faculty Bibliography
A number of heterocytous, mat-forming, tapering cyanobacteria in Rivulariaceae have recently been observed in both the Atlantic and Pacific coasts in the rocky intertidal and supratidal zones. These belong to the genera Nunduva, Kyrtuthrix, and Phyllonema and have been the subject of several recent studies. Herein, two new species of Nunduva (N. komarkovae and N. sanagustinensis) and two new species of Kyrtuthrix (K. munecosensis and K. totonaca) are characterized and described from the coasts of Mexico. Genetic separation based on the 16S-23S ITS region was pronounced (>10% in all comparisons). Morphological differences between all existing species in these two …
Trichotorquatus Gen. Nov. - A New Genus Of Soil Cyanobacteria Discovered From American Drylands, Nicole Pietrasiak, Sharon Reeve, Karina Osorio-Santos, David A. Lipson, Jeffrey R. Johansen
Trichotorquatus Gen. Nov. - A New Genus Of Soil Cyanobacteria Discovered From American Drylands, Nicole Pietrasiak, Sharon Reeve, Karina Osorio-Santos, David A. Lipson, Jeffrey R. Johansen
2021 Faculty Bibliography
Cyanobacteria are crucial ecosystem components in dryland soils. Advances in describing a–level taxonomy are needed to understand what drives their abundance and distribution. We describe Trichotorquatus gen. nov. (Oculatellaceae, Synechococcales, Cyanobacteria) based on four new species isolated from dryland soils including the coastal sage scrub near San Diego, California (USA), the Mojave and Colorado Deserts with sites at Joshua Tree National Park and Mojave National Preserve, California (USA), and the Atacama Desert (Chile). The genus is morphologically characterized by having thin trichomes (<4.5 lm wide), cells both shorter and longer than wide, rarely occurring single and double false branching, necridia appearing singly or in rows, and sheaths with a distinctive collar-like fraying and widening mid-filament, the feature for which the genus is named. The genus is morphologically nearly identical with Leptolyngbya sensu stricto but is phylogenetically quite distant from that genus. It is consequently a cryptic genus that will likely be differentiated in future studies based on 16S rRNA sequence data. The type species, T. maritimus sp. nov. is morphologically distinct from the other three species, T. coquimbo sp. nov., T. andrei sp. nov. and T. ladouxae sp. nov. However, these latter three species are morphologically very close and are considered by the authors to be cryptic species. All species are separated phylogenetically based on sequence of the 16S-23S ITS region. Three distinct ribosomal operons were recovered from the genus, lending difficulty to recognizing further diversity in this morphologically cryptic genus.
Changes In Health Behaviors During A Global Pandemic, Olivia Talamo
Changes In Health Behaviors During A Global Pandemic, Olivia Talamo
Senior Honors Projects
Coronavirus (COVID-19) is an infectious disease caused by the binding of SARS-CoV-2 to ACE-2 receptors. COVID-19 was first discovered in Wuhan, China in December of 2019 (CDC). By March 11, 2020 the World Health Organization (WHO) declared COVID-19 a worldwide pandemic. A COVID-19 infection can cause severe health consequences, including death. COVID-19 affects individuals of all ages. Individuals who are 60 years of age or older, and individuals with underlying medical conditions are considered vulnerable populations for severe consequences from COVID-19 infection (WHO). COVID-19 primarily spreads through physical contact. Respiratory droplets are produced from the nose and mouth when speaking, …
Heat And Chemical Cues Enhance Germination Rates In Fire-Dependent Chaparral Species, Zachary Litwinowicz
Heat And Chemical Cues Enhance Germination Rates In Fire-Dependent Chaparral Species, Zachary Litwinowicz
Senior Honors Projects
Climate change has caused an increase in the frequency and intensity of fire cycles in chaparral ecosystems. In environments impacted by wildfires, some plant species depend on complex fire cues to germinate. Determining how to best replicate wildfire cues is essential to using fire-recruiter species in restoration efforts. This study examines the effects of various simulated fire cues on four chaparral species: Arctostaphylos manzanita, A. viscida, Ceanothus cuneatus, and C. jepsonii. Seeds were exposed to heat, charate, liquid smoke, or combinations of treatments. Other germination cues, such as cold exposure for all species and acid exposure for Arctostaphylos species, were …