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Effects Of Prescribed Fire On Planted Oak Growth And Survival In Restored Savannas, Allison Earl

Masters Theses

Most oak savannas in the Midwestern United States have been lost to agriculture and habitat degradation. Because of their rarity and ability to support high plant and animal diversity, savannas are often a target for restoration. Oak savanna restoration frequently relies on direct planting of oak seedlings to establish the necessary tree canopy. Returning fire to the system is critical to the herbaceous component of the savanna, but managers risk damaging or killing trees if burning is introduced too soon. I studied growth and physiological responses of three oak species (Quercus alba, Q. macrocarpa, and Q. velutina …

Is Context Dependency Imperative To Understanding The Impacts Of Invasive Plants?, Brendan B. Haile

Masters Theses

Introduced exotic species have a tendency to become invasive and impact local biological communities. Invasions often impact community attributes such as cover and species richness, but these factors may also regulate patterns of invasion. In such cases, impacts may be dependent on the invasion context. We used data from the Buell-Small Succession Study, a long-term permanent plot study in the piedmont region of New Jersey, to document context dependency in invasion. To do this, we analyzed the factors that affected the colonization and growth of four invasive species, Alliaria petiolata, Lonicera japonica, Microstegium vimineum and Rosa multiflora, as well …

Identification And Analysis Of Genes With Differential And Tissue-Specific Expression In Poplars, Bailey Mitchell

Masters Theses

Poplars have become one of the most frequently studied plant species for their applications in biotechnology, commercial benefits, and ecological importance. Microarray analysis is commonly used to analyze differential gene expression in many organisms. Investigations have examined differential gene expression and performed functional analyses on a single tissue or organ within poplar trees or a closely related set of tissues and organs, but usually do not broadly analyze gene expression across a large number of tissues and organs in poplar. This thesis work aims to generate data on the most differentially expressed genes for the major groups of tissues and …

Impacts Of Plant-Microbe Interactions On Seedling Performance In A Riparian Forest Invaded By Lonicera Maackii, Taylor E. K. Strehl

Masters Theses

Soil microbes have profound impacts on plant growth and survival and can either promote or inhibit plant dominance. Exotic plants are often strongly invasive because they have escaped their natural enemies, potentially including antagonistic soil microbes. I examined how the invasive shrub Lonicera maackii and a common native tree, Acer negundo, responded to soil microbial communities to determine the role of soil microbes in regulating invasion success. This was done by growing both species with microbes from invaded (L. maackii) and uninvaded (A. negundo) soils collected from three locations within a riparian forest. Seedlings were …

Identifying Priority Conservation Areas And Strategies For Myotis Sodalis (Chiroptera: Vespertilionidae) Via Habitat And Connectivity Modeling, Ashleigh B. Cable

Masters Theses

Myotis sodalis, the Indiana bat, is a federally endangered bat species in the United States of America (USA). Conservation efforts are typically focused at identified maternity sites at local scales, however, the species is a regional migrant that interacts with its environment at multiple spatial scales. We are limited in our knowledge of landscape-level requirements of this species, especially in large areas such as Illinois, USA, where a wide range of environmental and landscape conditions exist. Many previous M. sodalis habitat studies have limited their focus to smaller spatial scales. Due to limitations in funding, personnel, and time, it …

Effects Of Dams On Fish And Macroinvertebrate Communities In The Vermilion River, Il, Ryan Patrick Hastings

Masters Theses

Dams are a main source of anthropogenic disturbances on river systems and can affect rivers in a variety of ways. Dams have the ability to change rivers from lotic to lentic habitats, affect sediment transportation, connectivity, water quality, linkages with wetlands and the quality of in-stream and riparian habitats. The Danville Dam was constructed in 1914 on the Vermilion River in Danville, Illinois and is becoming a safety hazard for human recreation on the Vermilion River, resulting in three deaths in the last 10 years. The Illinois Department of Natural Resources in conjunction with the city of Danville has proposed …

Seed Germination And Seed Bank Of Scutellaria Species, Jennifer O'Brien

Undergraduate Honors Theses

Florida skullcap, Scutellaria floridana Chapm. (Lamiaceae), is a federally threatened species found in the Florida Panhandle. Its habitat is a fire-prone, longleaf pine forest dominated by Aristida stricta Michx. var. beyrichiana (wiregrass). Other Scutellaria species used in the study are found in southeastern U.S., including two within the Florida Panhandle. The objective of this study was to compare several techniques to germinate seeds of Scutellaria incana, Scutellaria lateriflora, Scutellaria ovata ssp. ovata, and Scutellaria floridana, and to access the presence of a seed bank for S. floridana. For the germination study, Scutellaria later …

Activities Of Methionine-Γ-Lyase In The Acidophilic Archaeon “Ferroplasma Acidarmanus” Strain Fer1, M. A. Khan, Madeline M. Lopez-Munoz, Charles W. Kaspar, Kai F. Hung

Kai F. Hung

Biogeochemical processes on exposed pyrite ores result in extremely high levels of sulfuric acid at these locations. Acidophiles that thrive in these conditions must overcome significant challenges, including an environment with proton concentrations at pH 3 or below. The role of sulfur metabolism in the archaeon “Ferroplasma acidarmanus” strain fer1’s ability to thrive in this environment was investigated due to its growth-dependent production of methanethiol, a volatile organic sulfur compound. Two putative sequences for methionine- γ-lyase (EC 4.4.1.11), an enzyme known to carry out α,γ-elimination on L-methionine to produce methanethiol, were identified in fer1. Bioinformatic analyses identified a conserved pyridoxal-5′-phosphate …

Activities Of Methionine-Γ-Lyase In The Acidophilic Archaeon “Ferroplasma Acidarmanus” Strain Fer1, M. A. Khan, Madeline M. Lopez-Munoz, Charles W. Kaspar, Kai F. Hung

Faculty Research & Creative Activity

Biogeochemical processes on exposed pyrite ores result in extremely high levels of sulfuric acid at these locations. Acidophiles that thrive in these conditions must overcome significant challenges, including an environment with proton concentrations at pH 3 or below. The role of sulfur metabolism in the archaeon “Ferroplasma acidarmanus” strain fer1’s ability to thrive in this environment was investigated due to its growth-dependent production of methanethiol, a volatile organic sulfur compound. Two putative sequences for methionine- γ-lyase (EC 4.4.1.11), an enzyme known to carry out α,γ-elimination on L-methionine to produce methanethiol, were identified in fer1. Bioinformatic analyses identified a conserved pyridoxal-5′-phosphate …

Seed Germination And Seed Bank Of Scutellaria Species, Jennifer O'Brien

Student Honors Theses

Florida skullcap, Scutellaria floridana Chapm. (Lamiaceae), is a federally threatened species found in the Florida Panhandle. Its habitat is a fire-prone, longleaf pine forest dominated by Aristida stricta Michx. var. beyrichiana (wiregrass). Other Scutellaria species used in the study are found in southeastern U.S., including two within the Florida Panhandle. The objective of this study was to compare several techniques to germinate seeds of Scutellaria incana, Scutellaria lateriflora, Scutellaria ovata ssp. ovata, and Scutellaria floridana, and to access the presence of a seed bank for S. floridana. For the germination study, Scutellaria lateriflora and S. ovata ssp. ovata were stratified …

Assessing Multiple Endpoints Of Atrazine Ingestion On Gravid Northern Watersnakes (Nerodia Sipedon) And Their Offspring, Lorin A. Neuman-Lee, Karen F. Gaines, Kyle A. Baumgartner, Jayme R. Voorhees, James M. Novak, Stephen J. Mullin

Faculty Research & Creative Activity

Ecotoxicological studies that focus on a single endpoint might not accurately and completely represent the true ecological effects of a contaminant. Exposure to atrazine, a widely used herbicide, disrupts endocrine function and sexual development in amphibians, but studies involving live-bearing reptiles are lacking. This study tracks several effects of atrazine ingestion from female Northern Watersnakes (Nerodia sipedon) to their offspring exposed in utero. Twenty-five gravid N. sipedon were fed fish dosed with one of the four levels of atrazine (0, 2, 20, or 200 ppb) twice weekly for the entirety of their gestation period. Endpoints for the mothers included blood …

Interactions Of Diet And Behavior In A Death-Feigning Snake (Heterodon Nasicus), Andrew Michael Durso

Masters Theses

No abstract provided.

Liana Host Preference And Implications For Deciduous Forest Regeneration, Laura M. Ladwig, Scott J. Meiners

Scott J. Meiners

Lianas have the potential to shape forest communities and alter forest regeneration. However, impacts of lianas on forest regeneration, particularly in temperate forests, are largely unstudied. To understand potential liana impacts on the community we need to first know the location and intensity of liana burdens on host trees. We examined liana-tree host references within a series of young regenerating deciduous forests in the Piedmont region of New Jersey, USA. Established trees ($ 5 cm dbh) and the lianas associated with each tree were surveyed in 2008. The five most abundant liana species were Celastrus orbiculatus, Lonicera japonica, Parthenocissus quinquefolia, …

Multiple Endpoints Of Endocrine Disruption In Gravid Watersnakes (Colubridae:Nerodia) As A Function Of Ingestion Of A Common Herbicide, Lorin Anne Neuman-Lee

Masters Theses

No abstract provided.

Liana Host Preference And Implications For Deciduous Forest Regeneration, Laura M. Ladwig, Scott J. Meiners

Faculty Research & Creative Activity

Lianas have the potential to shape forest communities and alter forest regeneration. However, impacts of lianas on forest regeneration, particularly in temperate forests, are largely unstudied. To understand potential liana impacts on the community we need to first know the location and intensity of liana burdens on host trees. We examined liana-tree host references within a series of young regenerating deciduous forests in the Piedmont region of New Jersey, USA. Established trees ($ 5 cm dbh) and the lianas associated with each tree were surveyed in 2008. The five most abundant liana species were Celastrus orbiculatus, Lonicera japonica, Parthenocissus quinquefolia, …

Identification Of Anopheles (Nyssorhynchus) Marajoara (Diptera: Culicidae) In Bolivia Using Polymerase Chain Reaction And A Restriction Endonuclease, Gary Fritz, C. L. Brelsfoard, R. Rodriguez

Gary Fritz

Anopheles (Nyssorhynchus) marajoara Galvão & Damasceno (Diptera: Culicidae) is a member of the Albitarsis cryptic species complex and is a primary vector of human Plasmodium in parts of Brazil. We report the first record of An. marajoara in the department of Cochabamba and confirm its presence in the department of Santa Cruz, Bolivia. We also describe a PCR protocol producing a single amplicon (≈340 bp) of a section of the internal transcribed spacer 2 specific for members of the Albitarsis species complex; the polymerase chain reaction protocol did not amplify the DNA of 17 other species in the subgenus Nyssorhynchus. …

Identification Of Anopheles (Nyssorhynchus) Marajoara (Diptera: Culicidae) In Bolivia Using Polymerase Chain Reaction And A Restriction Endonuclease, Gary Fritz, C. L. Brelsfoard, R. Rodriguez

Faculty Research & Creative Activity

Anopheles (Nyssorhynchus) marajoara Galvão & Damasceno (Diptera: Culicidae) is a member of the Albitarsis cryptic species complex and is a primary vector of human Plasmodium in parts of Brazil. We report the first record of An. marajoara in the department of Cochabamba and confirm its presence in the department of Santa Cruz, Bolivia. We also describe a PCR protocol producing a single amplicon (≈340 bp) of a section of the internal transcribed spacer 2 specific for members of the Albitarsis species complex; the polymerase chain reaction protocol did not amplify the DNA of 17 other species in the subgenus Nyssorhynchus. …

Physiological Performance Of Thamnophis Hammondii Is Not Affected After Eating The Toxic Frog Xenopus Laevis, C. Drew Foster

Masters Theses

No abstract provided.

Heartworm And Lungworms In Illinois' Canids And Their Possible Effect On Coyote Condition And Reproduction, David G. Gregory

Masters Theses

This study focuses on the prevalence of heartworm and lungworms in Illinois' canid species, and the effect that they may have on condition (body weight, kidney fat, marrow fat) and reproduction (placental scars) on coyote populations. A total of 1,150 coyotes (Canis latrans), 2,269 domestic dogs, 47 red foxes (Vulpes vulpes), and 2 gray foxes (Urocyon cinereoargenteus) were examined. Prevalence of heartworms (Dirofilaria immitis) averaged 17.8% in coyotes, 3.0% in domestic dogs, 2.0% in red foxes, and 0% in gray foxes. Domestic dogs not receiving any type of prophylactic treatment had a higher prevalence (12.5%) of heartworms than dogs on …

Habitat Selection, Reproductive Success, And Impaling Patterns Of A Migratory Population Of Loggerhead Shrikes, Jeffrey D. Esely Jr.

Masters Theses

I studied habitat selection and reproductive success of a migratory population of Loggerhead Shrikes (Lanius ludovicianus migrans) as well as the temporal and spatial patterns of impaling exhibited by this population during the nesting season. The selection of breeding habitat was investigated at different spatial scales. Thirty-eight (67%) of 57 nests were located in osage orange (Maclura pomifera) trees. Shrike territories (area ≤ 200 m from nest site) contained significantly more pasture, fenceline, and perch sites, but less com, alfalfa, and forest than random sites. At larger spatial scales, more grassland was detected within 300 m …

The Role Of Bowfin, Amia Calva, In Multiple Species Management Plans, Benjamin Jacob Hausmann

Masters Theses

The major challenge to fisheries managers of the 21st century will be to maintain the diversity, not only of fishing opportunity, but also of traditionally non-game and economically unimportant species. With the relatively recent understanding of the importance of ecosystem level management, attention is being focused on native species that were often ignored or eradicated under past management practices. One such fish that has been largely ignored is the bowfin, Amia calva. Ecological data pertaining to bowfin natural history are limited and to date no attempt has been made to integrate bowfin into fisheries management decisions within the species native …

A Study Of The Lichens At Rocky Branch Nature Preserve, Clark County, Illinois, Eric B. Grunder

Masters Theses

In 1971, a graduate student at Eastern Illinois University, James E. Wiedman, studied the lichen flora of Rocky Branch Nature Preserve, Clark County, Illinois. During his study he collected, identified, and recorded a total of 64 lichen species. Since 1971, Rocky Branch Nature Preserve has experienced a dramatic increase in use by people and a concomittant decline in the quality of lichen habitats. In order to assess the decline of suitable lichen habitats and the reduction of lichen species a second study of the lichens at Rocky Branch Nature Preserve was undertaken. As part of this study, ten habitat sites …

Ecology And Community Relationships Of The River Cooter, Pseudemys Concinna In A Southern Illinois Backwater, Michael J. Dreslik

Masters Theses

In Illinois the River cooter, Pseudemys concinna, is an enigmatic endangered species. Even throughout its range, ecological studies on the River cooter are rare. During 1994 and 1995 I quantified the: growth rates and trends, population size and structure and dietary habits of a population from floodplain lake in Gallatin county, Illinois. Population estimation (Schnabel method) predicted 136 individuals at a density of 4.6 turtles/ha with a biomass of 3.6 Kg/ha. The sex ratio is slightly male biased (1:1.14). From back-calculated growth data, the von Bertalanffy growth model (Fabens' method) estimates males with a higher growth rate (k) and …

Parental Investment In The Red-Eared Slider Turtle, Trachemys Scripta, Michael D. Marlen

Masters Theses

This study was conducted to determine egg and hatchling components of the red-eared slider (Trachemys scripta). In addition, energy components transferred from egg to hatchling were used to determine the level of parental investment in embryogenesis and hatchling care. Eggs of the red-eared slider, collected from central Illinois ponds, were obtained by inducing gravid females to lay by an injection of oxytocin. Egg and hatchling lipids were extracted with petroleum ether while egg and hatchling protein content was determined using the micro-Kjeldahl procedure. Eggs averaged 70.7% water by mass, and dry mass of whole eggs and egg yolks averaged 2.4g …

Lichen Communities On White Oaks In East-Central Illinois, Michael R. Thon

Masters Theses

This study was conducted as a survey of epiphytic lichen communities occurring on white oak trees at Walnut Point State Park (Douglas Co.) and Fox Ridge State Park (Coles Co.). Using a system of cover classes to estimate lichen cover, quantitative data on the distribution and abundance of epiphytic lichens was obtained. These data were used to calculate summary statistics of each community including total cover, species richness, and Shannon diversity. A total of ten taxa representing six genera were found. The foliose lichen Physcia millegrana had the highest cover in the open canopy habitats while all other taxa had …

Quantitative Studies On Nodulation Competition Of Two Strains Of Bradyrhizobium Japonicum And Its Biological Control With A Bacteriophage, Jin Xiong

Masters Theses

Interstrain competition of Bradyrhizobium japonicum for nodulation of soybean (Glycine max) presents a serious problem to the field commercial inoculation practice. The more efficient, introduced strains are often outcompeted by the less efficient, indigenous strains. This study was conducted to determine if the competition could be effectively controlled by the massive introduction of a more efficient strain and/or the large scale reduction of a indigenous strain by the application of a bacteriophage specific to the indigenous one.

B. japonicum strain 61A123, common in Midwestern U.S. soils, and strain USDA110, representative of the strains used in commercial inocula, were chosen for …

Ecology And Interspecific Relationships Of The Painted Turtle, (Chrysemys Picta) In A Marsh-Fen Ecosystem, Eric S. Mcgee

Masters Theses

An ecological study of the painted turtle (Chrysemys picta) was conducted at the Fox River site in Chain O' Lakes State Park in northeastern Illinois from March to September in 1987. Findings were compared to two studies in 1986 concerning the common snapping turtle (Chelydra serpentina) and Blandings turtle (Emydoidea blandingi) also present in the area. Population densities and composition were evaluated to determine the degree of interspecific competition.

Two hundred-forty five turtles were captured in 1986 and 1987. Painted turtles comprised 75 percent of the chelonian population, while Blandings turtles and snapping turtles …

A Taxonomic Re-Evaluation Of Specimens Of The Genus Caloplaca In The E.L. Stover Herbarium Of Eastern Illinois University, Eric J. Cameron

Masters Theses

The genus Caloplaca is the largest genus in the family Teloschistaceae. The 103 species in the genus greatly outnumber any other in the family. Lichens of the genus Caloplaca are usually orange to orange-yellow in color, and range from crustose to subfoliose in form. The orange color is due to an anthraquinone, parietin, the location of which is taxonomically important in this genus of lichens. In some species it occurs only in the apothecia, while in others it is found in both the apothecia and thallus. The spores of this genus are polarilocular, and the width of the isthmus is …

The Bryophytes Of Fox Ridge State Park, Coles County, Illinois, David A. Breen

Masters Theses

A survey of Fox Ridge State Park in Coles County, Illinois revealed a total of 72 bryophyte species. Of these 68 were mosses and 4 were liverworts. Habitat and frequency for each species were recorded. Voucher specimens for each species have been placed in the Stover Herbarium at Eastern Illinois University, Charleston, Illinois.

As a result of this survey Astomum muhlenbergionum (Sw.) Grout. is a new addition to the list of Illinois bryophytes. In addition ten species are new reports for Coles County, Illinois. These are the mosses Amblystegium fluviatle (Hedw.) BSG, Brachythecium digastrum C. M. & Kindb. ex. Macoun …

A Study Of Cladonia Cryptochlorophaea And Morphologically Similar Species In Illinois, Indiana, And Wisconsin, Scott S. Wilcer

Masters Theses

Collections of Cladonias with cup-shaped podetia were made in Illinois, Indiana, and Wisconsin in order to determine the distribution of an atranorin-containing variant of Cladonia cryptochlorophaea, which was discovered in 1982 in Coles County, Illinois by Cheryl Cunningham. A second objective was a distributional study of the Cladonias having cup-shaped podetia in the same three state area.

A total of 591 specimens were collected from the three states. The collection areas for Illinois were: Jackson Hollow in Pope County, Giant City State Park and Touch of Nature Interpretive Center in Jackson and Williamson Counties, Starved Rock State Park in …