Digital Commons Network^™

Cloning And Expression Of A Tobacco Stearoyl-Acp Desaturase Gene Sbip24 And Its Interaction With Sabp2 In Sa Pathway, Amin J. Ferdous

Electronic Theses and Dissertations

Salicylic acid binding protein 2 (SABP2) that converts methyl salicylate to salicylic acid (SA) plays an obligatory role in the SA-mediated disease resistance pathway in plants. SABP2 interacts with SBIP24 in a yeast two-hybrid screening. SBIP24 belongs to the stearoyl-acyl carrier protein-desaturase protein family. To biochemically characterize the SBIP24, it was cloned from tobacco leaves using RT-PCR and expressed in E. coli. Recombinant SBIP24 was affinity purified using Ni-NTA chromatography. RT-PCR was performed to determine the role of SABP2 in modulating the expression SBIP24. TMV infected transgenic C3 (control tobacco plant containing empty silencing vector) and 1-2 (SABP2-silenced) …

Biochemical Characterization Of Sbip-470 And Its Role In Sa-Mediated Signaling In Plants, Danda P. Chapagai

Electronic Theses and Dissertations

Salicylic acid binding protein 2 (SABP2) is known to play a key role in Salicylic acid mediated defense pathway. SBIP-470 is SABP2 interacting protein that might be putatively involved in transfer of lipids. SBIP-470 was cloned without the signal peptide and expressed in E. coli. In vitro lipid binding assay using recombinant SBIP-470 failed to detect lipid binding. In vitro lipid transfer assay showed recombinant SBIP-470 does not transfer phospholipid. Study has shown that SBIP-470 is highly inducible upon infection with viral as well as bacterial pathogens. Induction of SBIP-470 expression upon the TMV infection most likely depends upon …

The Phenomenon Of Abstract Cognition Among Scholastic Chess Participants: A Case Study, Brent C. Laws

Electronic Theses and Dissertations

A qualitative investigation was conducted to explore the phenomenon of abstract cognition among a purposive sample of 5 secondary scholastic chess club participants. The case study enabled the researcher to explore the faculties of abstract cognition among students of contrasting skills and abilities in playing chess. The study also allowed for the consideration of potential visual-spatial, logical, academic, social competency and life benefits of chess play. Through analysis of interviews, chess simulations, blindfold chess play, and narration of chess lines and sequences, the investigator was able to extract meaning and code schemata into a holistic understanding of the phenomenon of …

The Vascular Flora Of Steele Creek Park And A Quantitative Study Of Vegetation Patterns In Canopy Gaps, Sullivan County, Tennessee, Phillip C. Klahs

Electronic Theses and Dissertations

An inventory of vascular plants was conducted in Steele Creek Park in Sullivan County, Tennessee from March 2013 to September 2014. The park covers an area of 892 ha and lies within the Ridge and Valley Province. The inventory of vascular plants documented 547 species of 323 genera and 101 families. Two hundred sixteen taxa were newly reported for Sullivan County. Tennessee Special Concern Species included Cardamine rotundifolia, Castanea dentata, Lonicera dioica, Allium tricoccum, Cypripedium acaule, and Panax quinquefolius. A single species, Juglans cinerea L., is considered a Tennessee Threatened Species. Vegetation patterns were studied quantitatively by installing 10 …

Kinetic And Kinematic Properties Of D-I Male Sprinters, Zhanxin Sha

Electronic Theses and Dissertations

The purpose of the study was to explore and determine kinetic and kinematic variables that related to D-I male sprinters maximal running velocity performance. The current study was separated into 3 individual chapters: 1.) Kinematic analysis magnitude of acceleration for braking and propulsion phases during foot contact phase at maximal speed sprinting; 2.) Using kinetic isometric mid-thigh pull variables to predict D-I male sprinters’ 60m performance; 3.) Relationship of whole and lower body angular momentum cancellation during terminal swing phase to sprint performance.

Methods: for sprint measurement all the athletes were participated 2 trials of 100% effort running through 60 …

Cellular-Based Brain Pathology In The Anterior Cingulate Cortex Of Males With Autism Spectrum Disorder, Jessica D. Crawford

Electronic Theses and Dissertations

Autism spectrum disorder (ASD) now affects 1 in 68 children in the United States. Disorders within this spectrum share hallmark deficits in verbal and nonverbal communication, repetitive behavior, and social interaction. The cause of ASD is still unknown. Even though hundreds of genetic abnormalities have been identified in ASD, these markers account for less than 1% of all ASD cases. Researchers continue to search for pathological markers common to all or most cases of ASD. The research presented in this dissertation used a novel combination of state-of-the-art methods to investigate brain pathology in ASD. Postmortem anterior cingulate cortex (ACC) from …

Hif-1Α In The Heart: Provision Of Ischemic Cardioprotection And Remodeling Of Nucleotide Metabolism, Joe Wu

Electronic Theses and Dissertations

In our studies we found that stabilized expression of HIF-1α in heart led to better recovery of function and less tissue death after 30 minutes of global ischemia, via mechanisms that preserve the mitochondrial polarization. Our group previously showed that HIF-1α conferred ischemic tolerance by allowing cardiomyocytes to use fumarate as an alternative terminal electron acceptor to sustain anaerobic mitochondrial polarization. The source of fumarate was identified as the purine nucleotide cycle (PNC). Here we discovered that HIF-1α upregulates AMP deaminase 2 (AMPD2), the entry point to the PNC. The combination of glycolysis and the PNC may protect the heart's …

A Comprehensive Study Of The Effects Of Neurotoxins On Noradrenergic Phenotypes, Neuronal Responses And Potential Intervention By Antidepressants In Noradrenergic Cells, Yan Wang

Electronic Theses and Dissertations

It has been reported that locus coeruleus (LC) degeneration precedes the degeneration of other neurons in the brain in some neurodegenerative diseases like Alzheimer’s disease (AD) and Parkinson’s disease (PD). However, the precise mechanisms of neurodegeneration remain to be elucidated. N-(2-chloroethyl)-N-ethyl-2-bromobenzylamine (DSP4) has been widely used as a noradrenergic neurotoxin in the development of AD and PD animal models for specific LC degeneration. However, the precise mechanism of action of DSP4 remains unclear. An increased systemic DNA damage caused by neurotoxin or oxidative stress has been found to be related to the pathogenic development of neurodegeneration. The process of neurodegeneration …

Characterization Of A Putative Phospholipase D ´ Like Gene As A Lipid Signaling Modulator And Its Role In Salicylic Acid Mediated Defense Pathway In Nicotiana Tabacum, Phillip T. Dean

Electronic Theses and Dissertations

Plants are in a perpetual evolutionary arms race with a wide range of pathogens. Their sessile nature has led plants to evolve defense mechanisms that can quickly recognize a unique stressor and deploy a resistance tailored for a specific attack. The salicylic acid (SA) mediated defense pathway has been shown to be one of the major defense tactics plants can initiate to defend themselves against microbial pathogens. Following a pathogen attack high levels of methyl salicylate (MeSA) are produced that can be converted to SA by the enzyme salicylic acid binding protein 2 (SABP2). A yeast two-hybrid screening was performed …

Regulation Of C-Reactive Protein Gene Expression And Function, Avinash N. Thirumalai

Electronic Theses and Dissertations

Human C-reactive protein (CRP) is the prototypic acute phase protein whose serum concentration increases rapidly during inflammation. CRP is also associated with atherosclerosis; it is deposited at lesion sites where it may interact with modified lipoproteins. There are 2 major questions regarding CRP: 1. How is the serum concentration of CRP regulated? 2. What are the functions of CRP in atherosclerosis?

Our first aim was to determine the role of the constitutively expressed transcription factor Oct-1 in regulating CRP gene expression. We found that Oct-1 overexpression inhibited (IL-6+IL-1β)- induced CRP gene expression; maximal inhibition required the binding of Oct-1 to …

Identification, Cloning, And Expression Of Tobacco Responsive To Dehydration Like Protein (Rd22), Sbip-355 And Its Role In Sabp2 Mediated Sa Pathway In Plant Defense, Hanadi Abdulaali Almazroue

Electronic Theses and Dissertations

Abscisic acid (ABA) induces RD22, responsive to dehydration stress gene. Salicylic acid (SA) has been the focus of research due to its role against pathogens and abiotic stress. Interaction between ABA and SA signaling pathways is still poorly understood. SA-Binding Protein 2 (SABP2) converts methyl salicylate to SA. An attempt was made to identify proteins that interact with SABP2 using a yeast 2-hybrid screening. Several interactors were identified. One of them, SA-Binding Protein 2 Interacting Protein-355 (SBIP-355), showed high homology to RD22. Bioinformatic approaches showed that SBIP-355 contains a BURP domain. Phylogenetic analysis reveals that SBIP-355 clustered into the …

Probiotic Potential Of Bacterial Isolates From ‘Amabere Amaruranu’ Cultured Milk, Blaise B. Boyiri

Electronic Theses and Dissertations

Probiotics are viable nonpathogenic microbes that positively affect host health. Probiotics inhibit infection, activate immunity, and promote mucosal-barrier development. Many microbes have probiotic activity. Nonetheless, the selection of stable strains and their specific mechanism(s) of action are not fully elucidated. Bacteria from ‘Amabere amaruranu’ cultured milk from Kenya were isolated and identified by PCR sequence analysis of the 16S rRNA gene. Isolates were examined for stability to acid and bile, antimicrobial activity, mucin production, and degradation and sensitivity to antibiotics, hence their potential for probiotics. Lactobacillus isolates were acid unstable, bile-stable, nonmucinolytic, and presented antibacterial activity. L. rhamnosus cell fractions …

Characterization Of A Putative Sir2 Like Deacetylase And Its Role In Sabp2 Dependent Salicylic Acid Mediated Pathways In Plant, Md I. Haq

Electronic Theses and Dissertations

Salicylic Acid Binding Protein2 (SABP2) is an enzyme known to play important role in SA mediated pathway. SBIP-428 (SABP2 Interacting Protein-428), a SIR2 like deacetylase, has been found to interact with SABP2. We demonstrate that SBIP-428 functions as a Sirtuin deacetylase. We show that SBIP-428 itself is lysine acetylated. Interactions of a SBIP-428 with SABP2 also raised the possibility of SABP2 itself being lysine acetylated. The recombinant purified SABP2 or native partially purified SABP2 displayed no acetylation. In response to TMV infection, the expression of SBIP-428 was down regulated at 48 hpi. In addition, SBIP-428 was up regulated in plant …

An Agent-Based Model Of Ant Colony Energy And Population Dynamics: Effects Of Temperature And Food Fluctuation, Guo Xiaohui

Electronic Theses and Dissertations

The ant colony, known as a self-organized system, can adapt to the environment by a series of negative and positive feedbacks. There is still a lack of mechanistic understanding of how the factors, such as temperature and food, coordinate the labor of ants. According to the Metabolic Theory of Ecology (MTE), the metabolic rate could control ecological process at all levels. To analyze self-organized process of ant colony, we constructed an agent-based model to simulate the energy and population dynamics of ant colony. After parameterizing the model, we ran 20 parallel simulations for each experiment and parameter sweeps to find …

Northern Saw-Whet Owl (Aegolius Acadicus) Abundance And Distribution In The Southern Appalachian Mountains Of Northeast Tennessee, John P. Mccormick

Electronic Theses and Dissertations

Little is known about the distribution, abundance, or life histories of the Northern Saw-whet Owl (Aegolius acadicus) in the Southern Appalachian Mountains of Northeast Tennessee. This study relied upon the Pennsylvania Protocol of audio playback of a Northern Saw-whet Owl call to monitor for owl presence at various areas above 3,500 feet in elevation. Owls were found at multiple areas in Northeast Tennessee, including Roan Mountain, Unaka Mountain, Rocky Fork, and the Pond Mountain Area. Statistical analysis revealed that these owls were not limited by habitat, showing equal presence in Hardwood habitats along with Spruce and/or Fir habitats. …

Production Of An Antibiotic-Like Activity By Streptomyces Sp. Couk1 Under Different Growth Conditions, Olaitan G. Akintunde

Electronic Theses and Dissertations

Streptomyces are known to produce a large variety of antibiotics and other bioactive compounds with remarkable industrial importance. Streptomyces sp. COUK1 was found as a contaminant on a plate in which Rhodococcus erythropolis was used as a test strain in a disk diffusion assay and produced a zone of inhibition against the cultured R. erythropolis. The identity of the contaminant was confirmed as Streptomyces through 16S rRNA sequencing. This Streptomyces produces a strong inhibitory compound in different growth media. A culture extract from inorganic salts starch agar was found to be very active; producing a large zone of inhibition …

An Investigation Of The Sled Push Exercise: Quantification Of Work, Kinematics, And Related Physical Characteristics, James Hoffmann Jr

Electronic Theses and Dissertations

The purpose of this dissertation was to describe the basic characteristics of performing resisted sprint training using a push sled for the enhancement of sport performance. Specifically, this dissertation served to: 1.) quantify the frictional forces involved between a push sled and an AstroTurf® surface at 6 loads, 2.) derive an estimation of mechanical work performed during sled push training, 3.) outline the velocity characteristics of 3 sled pushing loads scaled to the athletes body mass for comparison against their sprinting ability and 4.) determine the interrelations of fitness characteristics to the ability to sprint under heavy resistance.

The following …

Comparison Of Static And Countermovement Jump Variables In Relation To Estimated Training Load And Subjective Measures Of Fatigue, Matthew L. Sams

Electronic Theses and Dissertations

The purpose of this study was to compare changes in static and countermovement jump variables across a competitive season of collegiate soccer to estimated training load and subjective measures of fatigue. Monitoring data from 21 male collegiate soccer players were retrospectively examined. Nine vertical jump sessions occurred across the season in addition to daily training load assessment and daily mood-state assessment. Group average changes from the first testing session were calculated and compared to the group average training load for the 7 days preceding each vertical jump testing session for static and countermovement jump height and allometrically scaled peak power. …

Paleozoic Seed Bank And Their Ecological Significance, Petra Seka Yehnjong

Electronic Theses and Dissertations

Soil seed banks are a reservoir of viable seeds present in the soil in plant communities. They have been studied and characterized in various ways in different habitats. However, these studies are limited to modern seed banks. This study extends seed bank studies to the Paleozoic Era. It was hypothesized that size distribution and seed density in Paleozoic seed banks exhibit similar patterns as in modern seed banks. Seed sizes and seed density of fossil seed from Wise Virginia were estimated. Modern seed bank information was obtained from published data. Data were analyzed using one-way ANOVA and Kruskal-Wallis test. The …

Neogene Climate Change In Eastern North America: A Quantitative Reconstruction, Kyrie A. Baumgartner

Electronic Theses and Dissertations

Though much is known of the global paleoclimate during the Neogene, little is understood about eastern North America at that time. During the Neogene the global paleoclimate was transitioning from the warm temperatures and higher levels of precipitation of the Paleogene to the cooler temperatures and lower levels of precipitation during the Pleistocene. Eleven fossil sites from Neogene eastern North America were analyzed using the Coexistence Approach: Pollack Farm, Brandon Lignite, Legler Lignite, Alum Bluff, Bryn Mawr, Big Creek on Sicily Island, Brandywine, Gray Fossil Site, Citronelle, Peace Creek, and Ohoopee River Dune Field. Analyses showed a general trend that …

Subcloning, Expression And Purification Of Functional E. Coli Nucleotide Excision Repair Protein Uvra Using Impact-Cn System, Cathy W. Lin Mrs

Electronic Theses and Dissertations

DNA in cells is constantly damaged by both endogenous and exogenous genotoxic agents. DNA repair is a cellular machinery that counters DNA damage and thus preserve genome integrity. Nucleotide excision repair (NER) in Escherichia coli (E. coli) is one of the DNA repair systems that recognizes and removes a variety of DNA damage such as pyrimidine dimers, bulky chemical adducts, DNA intrastrand cross-links, etc. The genes responsible for E. coli NER incisions are UvrA, UvrB, and UvrC. As the first step of E. coli NER, DNA damage recognition is achieved through the UvrA₂B …

Inter-And Intra-Population Variability Across The Transcriptome Of Lake Baikal’S Endemic Copepod With Ramifications For Adapting To Climate Change, Larry L. Bowman Jr

Electronic Theses and Dissertations

The future of Lake Baikal’s biodiversity is uncertain in response to climate change. Unlike its diverse benthos, Lake Baikal’s zooplankton is species poor, with up to 96% of its biomass being composed of a single Calanoid copepod species, Epischura baikalensis. This study characterizes the genetic differentiation and differential gene expression of E. baikalensis. Using partial-transcriptome sequences obtained by 454 Rosche and Illumina sequencing technologies, the genetic differentiation at inferred single nucleotide polymorphism (SNP) sites and differential gene expression in populations sampled from various parts of the lake were analyzed. The functional genomics of genes showed significant differential …

Vitamin D Status Of College Students: Implications For Health Leaders, Eileen M. Cress

Electronic Theses and Dissertations

Vitamin D deficiency is considered to be a pandemic with implications for compromised bone health and other chronic diseases. Few studies have examined vitamin D status in college-aged individuals where prevention of future health consequences is still possible. Serum vitamin D 25(OH)D status and vitamin D intake were examined in 98 college students ages 18-29 years during winter. BMI was classified as < 25and 25 or greater. Race was categorized as Caucasian or other. Overall, 69.5% had suboptimal serum vitamin D levels, <30ng/mL. Only 8 students (8.2%) met the EAR (400 IU) per day for vitamin D intake. t tests were used to determine if there were significant differences in serum vitamin D level and dietary intake based on gender, race and BMI. Significant differences were found in serum vitamin D level when compared by gender and race. Females tended to have a higher serum vitamin D level than males. Those representing minorities had lower serum vitamin D levels than Caucasians; One hundred percent of the minority students had suboptimal serum vitamin D levels. Based on these findings, dietitians should increase efforts to target college-aged individuals in educational programming related to factors affecting vitamin D synthesis, vitamin D intake, and health consequences of suboptimal vitamin D status, particularly in winter. Consideration should be given to vitamin D fortification of foods that meet the preferences of today’s consumer.

The Effectiveness Of The Implementation Of The Kids Eat Right Rd Parent Empowerment Program At Johnson City Head Start Centers, Emily M. Stern

Electronic Theses and Dissertations

Obesity among children is a public health concern. Preschool-­‐aged children, especially those from low-­‐income families, are no exception to the obesity epidemic. During the RD Parent Empowerment Program, parents of Head Start children in Johnson City, TN completed a structured education program over the course of 4 workshops related to healthy habits of families. The goal was to empower parents to shop smart, cook healthy, and eat right. The Family Nutrition and Physical Activity (FNPA) screening tool was used as an assessment tool to evaluate behavior change over the course of the program. Improvement in overall FNPA score was …

Adaptive Strategies For Foraging And Their Implications For Flower Constancy, Or: Do Honey Bees Multitask?, Ashley E. Wagner

Electronic Theses and Dissertations

Classical experiments on honey bee time-memory showed that foragers trained to collect food at a fixed time of day return the following day with remarkable time-accuracy. Previous field experiments revealed that not all foragers return to a food source on unrewarded test days. Rather, there exist 2 subgroups: “persistent” foragers reconnoiter the source; “reticent” foragers wait in the hive for confirmation of source availability. To examine how these foragers contribute to a colony’s ability to reallocate foragers across sources with rapidly changing availabilities, foragers were trained to collect sucrose during a restricted window for several days and observed over 3 …

Diel Patterns Of Foraging Aggression And Antipredator Behavior In The Trashline Orb-Weaving Spider, Cyclosa Turbinata, James C. Watts

Electronic Theses and Dissertations

Few studies have rigorously assessed the adaptive value of diel rhythms in animals. We laid the groundwork for assessing the adaptive rhythm hypothesis by assaying diel rhythms of foraging and antipredator behavior in the orb-weaving spider Cyclosa turbinata. When confronted with a predator stimulus in experimental arenas, C. turbinata exhibited thanatosis behavior more frequently and for longer durations during the day. However, assays of antipredator response within webs revealed more complex diel patterns of avoidance behaviors and no pattern of avoidance behavior duration. Assays of prey capture behavior found that the likelihood of exhibiting prey capture behavior varied significantly …

Characterization Of Tonb In Rhizobium Leguminosarum Atcc 14479, Brian D. Hill

Electronic Theses and Dissertations

Rhizobium leguminosarum is a gram-negative soil bacterium that requires iron for survival. However, iron becomes insoluble in the presence of oxygen at physiological pH. In response, Rhizobia species have used siderophore mediated iron transport systems to meet their iron requirements. R. leguminosarum ATCC 14479 produces the trihydroxymate siderophore vicibactin and we hypothesize that the import of the ferric iron-vicibactin complex is energized by the TonB-ExbB-ExbD system. Here, we have identified a putative tonB gene. A tonB mutant was created and compared with wild type in its ability to transport ⁵⁵Fe-vicibactin. Also, the putative TonB of R. leguminosarum ATCC …

Non-Anguimorph Lizards Of The Late Oligocene And Early Miocene Of Florida And Implications For The Reorganization Of The North American Herpetofauna, Kevin Chovanec

Electronic Theses and Dissertations

Paleokarst deposits from the Oligo-Miocene of northern Florida preserve undescribed herpetofaunal remains that fill important temporal and geographic gaps in our understanding of Cenozoic lizard evolution. Here I describe and discuss the non-anguimorph lizard diversity of the Brooksville 2 (Ar2) and Miller (He1) local faunas to test for patterns of regional and latitudinal provincialism in the contemporary North American record. Collectively, the sites are significant for documenting 1) extralimital occurrences of the tropical clades Anolis and Corytophaninae, 2) a substantial temporal range extension of the modern southeastern endemic Rhineuridae, 3) the earliest record of eublepharid gekkotans from North America, and …