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The Cottonwood Ranch Riparian Management Case Study, Sherman Swanson, Kent Mcadoo, Agee Smith, Sandra Wyman Dec 2020

The Cottonwood Ranch Riparian Management Case Study, Sherman Swanson, Kent Mcadoo, Agee Smith, Sandra Wyman

IGC Proceedings (1997-2023)

No abstract provided.


Student Success Of Online Vs. In-Person Biology Courses At Virginia Community Colleges, Jennifer Claire Scott Dec 2020

Student Success Of Online Vs. In-Person Biology Courses At Virginia Community Colleges, Jennifer Claire Scott

Doctoral Dissertations and Projects

Community colleges have a significant role in preparing students for STEM-related careers through certificates, degrees, and transfers to four-year institutions. In addition, online education is a growing mode of higher education, particularly for community college students. However, community college and online students are both at a high risk of attrition and show a lower success rate for degree completion. The purpose of this study was to identify differences in attrition and success between students in online and in-person biology courses at Virginia community colleges. Also, this study addressed downstream effects of online education by examining course completion of second-semester biology …


Alternative Treatments To Koalas With Chlamydia, Kelsey Thornton Nov 2020

Alternative Treatments To Koalas With Chlamydia, Kelsey Thornton

Fall Showcase for Research and Creative Inquiry

Koala populations have declined rapidly in the past 2 decades due to many reasons such as disease, vehicle collisions, dog attacks, urbanization and deforestation, and climate-related issues. Chlamydia is one of the leading causes for population declines in koalas. Koalas are difficult to treat for chlamydia because antibiotic treatment kills the specialized gut bacteria they have and need for degrading toxic compounds within eucalyptus leaves, their only source of food. I propose that doxycycline, a drug with a 97% cure rate and reduced dysbiosis, to be administered at higher concentrations less frequently. Additionally, I propose that koalas treated with antibiotics …


Population Dynamics Of Waterfowl Wintering In The Mid-Atlantic Region, Usa, Abigail Harris, Thomas Hoke Nov 2020

Population Dynamics Of Waterfowl Wintering In The Mid-Atlantic Region, Usa, Abigail Harris, Thomas Hoke

Fall Showcase for Research and Creative Inquiry

A recent study (Rosenberg et al. 2019) has shown that bird populations in North America are experiencing major declines except for a few groups including waterfowl. However, this study focused only on the summer breeding populations and did not focus on regional dynamics. We utilized data from 62 Christmas Bird Count (CBC) count circles to evaluate population dynamics of common wintering waterfowl in the coastal Mid-Atlantic region (Delaware=7, Maryland=16, Virginia=18, North Carolina=21) since 1950. We found a 36% decline of wintering waterfowl relative abundance compared to 1950s. American wigeon and Canada goose had major population decreases while Snow goose had …


Adios Adjuvant: Combination Immunotherapy For Pediatric Acute Lymphoblastic Leukemia (All) Patients, Arleigh Wood Nov 2020

Adios Adjuvant: Combination Immunotherapy For Pediatric Acute Lymphoblastic Leukemia (All) Patients, Arleigh Wood

Fall Showcase for Research and Creative Inquiry

Cancer treatments are shifting from heavy adjuvant therapies to immunological approaches, such as carT cell therapy. By simultaneously administering two known successful treatments for ALL, Blinatumomab and Kymriah, a high rate of remission can be accomplished in pediatric patients with relapsed ALL. Higher rates of remission, prolonged immunity, and less side effects are the projected results based on previously published studies. Combining these two therapies will likely produce more successful results compared to if the drugs were administered independently. This will hopefully translate into a faster return to daily living activities and less chronic effects during such an important developmental …


Combining Treatments For Opioid Addictions, Raquel Perez Nov 2020

Combining Treatments For Opioid Addictions, Raquel Perez

Fall Showcase for Research and Creative Inquiry

In 2018 the National Survey of Drug Use and Health reported that 9.9 million people misused prescription pain relievers out of 10.3 million who reported using opioids. Opioid abuse has grown from just being considered a medical dilemma, it has clearly become a social and economic issue (Eaton and Vettese, 2020). This proposal will be investigating the combination of pre-existing pharmacological treatments and support group therapy. This is not a new concept however because of the nature of opioid addictions having severe withdrawal symptoms most treatments are primarily medication base. Drug addictions have been known to carry a negative stigma …


Illegal Killing Of Nongame Wildlife And Recreational Shooting In Conservation Areas, Jay D. Carlisle, Eve C. Thomason, James R. Belthoff, Julie A. Heath, Kristina J. Parker, Heather M. Hayes, Madeline C. Alberg, Sandra M. Amdor, Steven E. Alsup, Stephanie E. Coates Nov 2020

Illegal Killing Of Nongame Wildlife And Recreational Shooting In Conservation Areas, Jay D. Carlisle, Eve C. Thomason, James R. Belthoff, Julie A. Heath, Kristina J. Parker, Heather M. Hayes, Madeline C. Alberg, Sandra M. Amdor, Steven E. Alsup, Stephanie E. Coates

Intermountain Bird Observatory Publications and Presentations

Illegal killing of nongame wildlife is a global yet poorly documented problem. The prevalence and ecological consequences of illegal killing are often underestimated or completely unknown. We review the practice of legal recreational shooting and present data gathered from telemetry, surveys, and observations on its association with illegal killing of wildlife (birds and snakes) within conservation areas in Idaho, USA. In total, 33% of telemetered long‐billed curlews (Numenius americanus) and 59% of other bird carcasses found with known cause of death (or 32% of total) were illegally shot. Analysis of spatial distributions of illegal and legal shooting is …


Assess Physical Functioning Of Riparian Systems With An Eye Toward Management, Sherman Swanson, Sandra Wyman, Kent Mcadoo Oct 2020

Assess Physical Functioning Of Riparian Systems With An Eye Toward Management, Sherman Swanson, Sandra Wyman, Kent Mcadoo

IGC Proceedings (1997-2023)

No abstract provided.


Inheritability Of Ciprofloxacin-Induced Mitochondrial Mutations From Parental To Offspring Generation Using Quantitative Polymerase Chain Reaction, Rose Mccoy Oct 2020

Inheritability Of Ciprofloxacin-Induced Mitochondrial Mutations From Parental To Offspring Generation Using Quantitative Polymerase Chain Reaction, Rose Mccoy

Honors Theses

In all eukaryotes, mitochondria are known as the powerhouse of the cell (Siekevitz, 1957). In plants, however, their mitochondrial genome is especially strange. Plant mitochondrial genomes are extremely large and contain both linear and circular subgenomic DNA fragments. Plant mitochondrial genomes undergo a significant amount of mutations in the form of rearrangements. However, it is not known how often these rearrangements are inherited by the next generation. It is thought that plant cells that are still dividing have higher rates of DNA repair, such as double-strand break repair, to ensure the quality of that plant lineage. As follows, it is …


A Comparison Of Invasive And Native Plants In An Abandoned Limestone Quarry, Diana Borse, Sophia Atkinson, Dana Dudle Oct 2020

A Comparison Of Invasive And Native Plants In An Abandoned Limestone Quarry, Diana Borse, Sophia Atkinson, Dana Dudle

Annual Student Research Poster Session

The abandoned limestone quarry in the DePauw Nature Park is a site of interest for research into plant community establishment due to the harsh, heterogenous, and fluctuating environment. Because the limestone floor of the quarry is a novel anthropogenic environment, every plant species in the quarry had to be introduced somehow. Perhaps native species that are able to establish populations in the quarry are more likely to share traits with invasive species. Using information collected from scientific articles, I compared traits of three pairs of plants with similar forms to compare their life history traits to see if any patterns …


Antibiotic Resistance And Variability In The Physiological Profiles Of Streambed Bacterial Communities: Implication Of Wastewater Treatment Plant Effluents, Madeline Draper, Amerti Guta, Philips Akinwole Oct 2020

Antibiotic Resistance And Variability In The Physiological Profiles Of Streambed Bacterial Communities: Implication Of Wastewater Treatment Plant Effluents, Madeline Draper, Amerti Guta, Philips Akinwole

Annual Student Research Poster Session

The effluents of wastewater treatment plants (WWTPs) include a complex mixture of nutrients and toxic substances, thus, the potential exists for the effluent to significantly impact the biochemical characteristics and bacterial communities of the receiving freshwater ecosystem. Our findings highlight the worrisome impacts of WWTPs on microbial biomass, coliform forming units, bacterial metabolic diversity, and antibiotic resistance patterns on the receiving water. In this study, microbial biomass and coliform forming units were significantly higher at the WWTP outfall compared to the reference site. Furthermore, this report revealed significant differences in the composition of bacterial communities in the context of WWTP …


Lifelines Fall 2020, Southern Adventist University Oct 2020

Lifelines Fall 2020, Southern Adventist University

Lifelines - Biology Department Newsletter

The Fall 2020 issue of Lifelines contains articles on Insights from the Professor, Alumni Highlight, and Department Happenings.


A Preliminary Look Into Regional Primary Succession In The Depauw University Nature Park Quarry, Sophia Atkinson, Diana Borse, Dana Dudle Oct 2020

A Preliminary Look Into Regional Primary Succession In The Depauw University Nature Park Quarry, Sophia Atkinson, Diana Borse, Dana Dudle

Annual Student Research Poster Session

Quarries are anthropogenic landscapes that when abandoned, leave a blank slate in the environment for species to come in and repopulate the area. This gives way to primary succession, a process that re-vegetates areas devoid of soil. The goal of this research is to investigate where the abandoned limestone quarry at the DePauw University Nature Park is in terms of its successional phase since extraction stopped in 1977. Throughout the summer of 2020, plant species were identified along with the specific region and sub-habitat, the main sub-habitats being the temporary ponds, quarry spoils, talus slopes, flat limestone areas, and damp …


Hsa-Mir-4520-2-3p: A Potential Modulator Of Covid-Related Ace2, Molly Ruggles, Nipun Chopra Oct 2020

Hsa-Mir-4520-2-3p: A Potential Modulator Of Covid-Related Ace2, Molly Ruggles, Nipun Chopra

Annual Student Research Poster Session

ACE2 is a transmembrane receptor located in cells in various tissues around the body. Its normal role is the conversion of Angiotensin II to Angiotensin 1-7 leading to vasodilation and a subsequent reduction in blood pressure via the renin-angiotensin-aldosterone system. ACE2 also plays a pivotal role in the infection of COVID-19 as it determines entry of virus into human cells. SARS-CoV-2 uses one of its four structural proteins, the spike (S) glycoprotein, to bind to the ACE2 receptor. This entry into the cell begins the process of infection and spread of the disease; because of the abundance of ACE2 throughout …


Cardiac Neuroanatomy And Chronotropic Modulation Of The Adult Giant Danio Heart, Alyssa Koch, Emma Nelson, Pascal Lafontant Oct 2020

Cardiac Neuroanatomy And Chronotropic Modulation Of The Adult Giant Danio Heart, Alyssa Koch, Emma Nelson, Pascal Lafontant

Annual Student Research Poster Session

Studies in non-mammalian models species have contributed significantly to our understanding of the biology and the nature of innervation in the heart. The giant danio (D. malabaricus) is a teleost fish species closely related to zebrafish, that is also capable of heart regeneration. We previously described the development and maturation of the giant danio (GD) heart. However, little is known about its innervation. We hypothesized that the pattern of innervation in the GD heart is anatomically and physiologically complex, and that the heart is responsive to physiological modulation similar to that seen in cyprinid fish and mammals. Using various neuronal …


Characterizing The Behavior Of Mutated Proteins With Emcap: The Energy Minimization Curve Analysis Pipeline, Matthew Lee, Bodi Van Roy, Filip Jagodzinski Oct 2020

Characterizing The Behavior Of Mutated Proteins With Emcap: The Energy Minimization Curve Analysis Pipeline, Matthew Lee, Bodi Van Roy, Filip Jagodzinski

WWU Honors College Senior Projects

Studies of protein mutants in wet laboratory experiments are expensive and time consuming. Computational experiments that simulate the motions of protein with amino acid substitutions can complement wet lab experiments for studying the effects of mutations. In this work we present a computational pipeline that performs exhaustive single-point amino acid substitutions in silico. We perform energy minimization as part of molecular dynamics (MD) of our generated mutant proteins, and the wild type, and log the energy potentials for each step of the simulations. We motivate several metrics that rely on the energy minimization curves of the wild type and mutant, …


Sensory Ecology Bio 522, Michael Cerbo Sep 2020

Sensory Ecology Bio 522, Michael Cerbo

Library Impact Statements

No abstract provided.


To Feed Or Not To Feed: Examining The Effects Of Provisioning Tourism On Nurse Sharks In Caye Caulker, Belize, Carlee Jackson Aug 2020

To Feed Or Not To Feed: Examining The Effects Of Provisioning Tourism On Nurse Sharks In Caye Caulker, Belize, Carlee Jackson

All HCAS Student Capstones, Theses, and Dissertations

Wildlife tourism is increasing in popularity around the world, creating the need to understand alterations in animal behavior and spatial distributions that may occur due to associated anthropogenic disturbances. Nurse sharks (Ginglymostoma cirratum, Bonnaterre 1788) are commonly used for wildlife tourism within the Caye Caulker Marine Reserve in Belize. Shark and Ray Village (SRV) is a site within the reserve where nurse sharks are consistently fed by tour/snorkel boats to create an interactive experience with tourists, termed provisioning tourism. Prior to this experiment, no studies had been conducted in SRV to evaluate the impact of provisioning tourism (tourism …


Fundamentals Of Biology Bio 110, Michael Cerbo Jul 2020

Fundamentals Of Biology Bio 110, Michael Cerbo

Library Impact Statements

No abstract provided.


Support For Science-Related Educational Training And Trauma-Informed Work In Somaliland, David Varner Jul 2020

Support For Science-Related Educational Training And Trauma-Informed Work In Somaliland, David Varner

Summer Scholarship, Creative Arts and Research Projects (SCARP)

No abstract provided.


Investigation Of Multiphasic 3d-Bioplotted Scaffolds For Site-Specific Chondrogenic And Osteogenic Differentiation Of Human Adipose-Derived Stem Cells For Osteochondral Tissue Engineering Applications, Julia T. Oxford Jul 2020

Investigation Of Multiphasic 3d-Bioplotted Scaffolds For Site-Specific Chondrogenic And Osteogenic Differentiation Of Human Adipose-Derived Stem Cells For Osteochondral Tissue Engineering Applications, Julia T. Oxford

Biomolecular Research Center Publications and Presentations

Osteoarthritis is a degenerative joint disease that limits mobility of the affected joint due to the degradation of articular cartilage and subchondral bone. The limited regenerative capacity of cartilage presents significant challenges when attempting to repair or reverse the effects of cartilage degradation. Tissue engineered medical products are a promising alternative to treat osteochondral degeneration due to their potential to integrate into the patient's existing tissue. The goal of this study was to create a scaffold that would induce site-specific osteogenic and chondrogenic differentiation of human adipose-derived stem cells (hASC) to generate a full osteochondral implant. Scaffolds were fabricated using …


Velvet Longhorned Beetle (Trichoferus Campestris (Faldermann), Taryn M. Rodman, Lori R. Spears, Diane G. Alston, Cami Cannon, Kristopher Watson, Joey Caputo Jul 2020

Velvet Longhorned Beetle (Trichoferus Campestris (Faldermann), Taryn M. Rodman, Lori R. Spears, Diane G. Alston, Cami Cannon, Kristopher Watson, Joey Caputo

All Current Publications

The velvet longhorned beetle is an invasive wood-boring pest that is native to Asia and Russia. It infests fruit, forest, and ornamental trees, as well as green and dry wood, such as timber and lumber. This fact sheet provides a description, and information on life history, plant hosts, injury symptoms, monitoring, and management.


Estimation Of Immunoglobulin A, Immunoglobulin G, And Immunoglobulin M Antibody Levels In Laboratory Mice Balb/C Infected With Entamoeba Histolytica And Treatment With Aqueous Extracts Of Cyperus Rotundus And Thymus Serpyllum, Farhan K. Hussein, Ashraf J. Mahmoud, Buthainah J. Yousif Jun 2020

Estimation Of Immunoglobulin A, Immunoglobulin G, And Immunoglobulin M Antibody Levels In Laboratory Mice Balb/C Infected With Entamoeba Histolytica And Treatment With Aqueous Extracts Of Cyperus Rotundus And Thymus Serpyllum, Farhan K. Hussein, Ashraf J. Mahmoud, Buthainah J. Yousif

Polytechnic Journal

Sixty Balb/c mice (Mus musculus) were used in the present study. It was conducted out in the animal house of the Department of Biology/College of Education for Women. The mice were infected with Entamoeba histolytica isolated from positive stool samples obtained from children in pediatric hospital in Kirkuk city governorate followed by treatment with aqueous extract of Cyperus rotundus and Thymus serpyllum. Results revealed a significant increase of P < 0.05 in immunoglobulin A, immunoglobulin G,, and immunoglobulin M antibody levels among infected mice when it was compared with the control and treated groups of aqueous extracts of studied plant. This indicates the efficacy of these extracts as treatment.


The Impact Of Probiotics In Respiratory Diseases, Rafee H. Askandar, Nasim Ebrahimi Jun 2020

The Impact Of Probiotics In Respiratory Diseases, Rafee H. Askandar, Nasim Ebrahimi

Polytechnic Journal

Probiotics are viable microorganisms that, if adequately administered, confer great benefits to the host for the prevention or treatment of a wide range of human diseases, including recurrent respiratory tract infection (RRTI), cystic fibrosis, allergies, and chronic obstructive pulmonary disease (COPD). One of the current problems is that the overuse of antibiotics during respiratory tract infection has led to increased resistance to them, which has been demonstrated in numerous examinations that specific lactic acid bacteria (LAB), one of the key probiotics, against bacterial and viral infections of the respiratory and gastrointestinal tract, have a protective effect. On the other hand, …


Estimation Of Immunoglobulin A, Immunoglobulin G, And Immunoglobulin M Antibody Levels In Laboratory Mice Balb/C Infected With Entamoeba Histolytica And Treatment With Aqueous Extracts Of Cyperus Rotundus And Thymus Serpyllum, Farhan K. Hussein, Ashraf J. Mahmoud, Buthainah J. Yousif Jun 2020

Estimation Of Immunoglobulin A, Immunoglobulin G, And Immunoglobulin M Antibody Levels In Laboratory Mice Balb/C Infected With Entamoeba Histolytica And Treatment With Aqueous Extracts Of Cyperus Rotundus And Thymus Serpyllum, Farhan K. Hussein, Ashraf J. Mahmoud, Buthainah J. Yousif

Polytechnic Journal

Sixty Balb/c mice (Mus musculus) were used in the present study. It was conducted out in the animal house of the Department of Biology/College of Education for Women. The mice were infected with Entamoeba histolytica isolated from positive stool samples obtained from children in pediatric hospital in Kirkuk city governorate followed by treatment with aqueous extract of Cyperus rotundus and Thymus serpyllum. Results revealed a significant increase of P < 0.05 in immunoglobulin A, immunoglobulin G,, and immunoglobulin M antibody levels among infected mice when it was compared with the control and treated groups of aqueous extracts of studied plant. This indicates the efficacy of these extracts as treatment.


The Impact Of Probiotics In Respiratory Diseases, Rafee H. Askandar, Nasim Ebrahimi Jun 2020

The Impact Of Probiotics In Respiratory Diseases, Rafee H. Askandar, Nasim Ebrahimi

Polytechnic Journal

Probiotics are viable microorganisms that, if adequately administered, confer great benefits to the host for the prevention or treatment of a wide range of human diseases, including recurrent respiratory tract infection (RRTI), cystic fibrosis, allergies, and chronic obstructive pulmonary disease (COPD). One of the current problems is that the overuse of antibiotics during respiratory tract infection has led to increased resistance to them, which has been demonstrated in numerous examinations that specific lactic acid bacteria (LAB), one of the key probiotics, against bacterial and viral infections of the respiratory and gastrointestinal tract, have a protective effect. On the other hand, …


The Development Of An H1 Embryonic Stem Cell Line To Study The Role Of The Oncogenes Lmo1 And Mycn In Human Neuroblastoma Formation, Vincent Quiroz Jun 2020

The Development Of An H1 Embryonic Stem Cell Line To Study The Role Of The Oncogenes Lmo1 And Mycn In Human Neuroblastoma Formation, Vincent Quiroz

Electronic Theses, Projects, and Dissertations

Neuroblastoma (NB) is an extracranial tumor that affects the nervous system and accounts for approximately 650 – 800 cases diagnosed per year in children under the age of 5 (www.cancer.org/cancer/neuroblastoma/about/key-statistics.html). NB occurs at a relatively rare rate of 10.2 per million children under 15 years old but accounts for 12-15% of pediatric cancer death because patients with high-risk NB (HRNB) have 5-year survival rates between 40-50%(Brodeur, 2003; Park et al. 2010). Developmental biology research has recognized neural crest cells (NCC) as the progenitor cells of NB, as tumors form in the trunk NC derived sympathetic nervous system (Dupin, 2013; Simões-Costa …


Upcoming: Coming Spring 2018: Colby On Climate, Colby College May 2020

Upcoming: Coming Spring 2018: Colby On Climate, Colby College

Colby Magazine

No abstract provided.


A Review Of Plant-Soil Feedbacks And Their Importance For Palouse Prairie Restoration And Management, Rachael Sv Pentico May 2020

A Review Of Plant-Soil Feedbacks And Their Importance For Palouse Prairie Restoration And Management, Rachael Sv Pentico

2020 Symposium Posters

A plant-soil feedback (PSF) is the process in which plants alter both the biotic and abiotic characteristics of the soil they grow in. These changes in the soil composition alter which plants can grow and survive there in the future. Negative PSFs occur when plants struggle to grow in soil that was previously inhabited, due to a buildup of soil pathogens. Positive PSFs, however, provide benefits to the plants due to an abundance of soil microbes, such as AMF. Understanding the effects that PSFs have on plant communities and dynamics could be vital for restoring damaged ecosystems, like the Palouse …


Population Genetics Of A Recent Range Expansion By The Southern Pine Beetle, Dendroctonus Frontalis, Into The Northeastern United States, Megan Stubbs May 2020

Population Genetics Of A Recent Range Expansion By The Southern Pine Beetle, Dendroctonus Frontalis, Into The Northeastern United States, Megan Stubbs

Honors Theses

Population genetics as a field of study aims to determine the genetic variation among individuals in a population, and differences among populations. Certain population genetic analyses can provide such information and be used to better understand the biological aspects to a species’ expansion beyond its native range. The southern pine beetle (SPB), Dendroctonus frontalis, has become an invasive pest to pine forests in northeastern United States with its recent range expansion. Nine microsatellite loci were first developed and then used in analyses. To determine what the genetic variation is among individuals in SPB populations across its entire range, including …