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Anthropogenic Disturbance Modulates Mammal Community Diversity, Assembly, & Abundance: Emerging Infectious Disease Risk In The Greater Yellowstone Ecosystem, Leticia Andrea Gutiérrez Jiménez

Dissertations

This dissertation examines the role of mammalian biodiversity in maintaining overall ecosystem health in the Greater Yellowstone Ecosystem (GYE). The study explores the pathways by which anthropogenic disturbance prevents or promotes the emergence of human infectious diseases. I studied two paramount research questions: Question 1: What are the direct effects of anthropogenic disturbance on rodent community assemblages and the consequent indirect effects on public health? I first surveyed the GYE rodent community and their pathogens by using land use as a measure of anthropogenic disturbance (e.g., human settlements, horseback ranches, pastures, undisturbed). I identified pathogens in rodent blood samples by …

Synthetic Ion Channels: A New Class Of Membrane Disruptor And Efflux Pump Inhibitor For The Recovery Of Antibiotic Potency, Mohit Bharatkumar Patel

Dissertations

Antibiotic resistance has become a world-wide health care crisis. In 2013 there were 50,000 deaths in U.S. and EU, associated with hospital acquired bacterial infections. This problem is exacerbated by the lack of new antibiotics in development. Here, we report that synthetic amphiphiles represent a new class of adjuvants that rescue antibiotic potency against multidrug resistant bacteria. Hydraphiles are amphiphiles, designed and synthesized in Gokel lab, that show many of the same properties as protein ion channels. Hydraphiles were previously shown to have antimicrobial activity against Escherichia coli, Bacillus subtilis and Saccharomyces cerevisiae. Here, we report that hydraphiles recover the …

Endogenous Small Interfering Rna: Insights Into Esirna Biogenesis And Their Precursors, Andrew White Harrington

Dissertations

Rarely in research is the path to an answer straightforward. Initial questions lead to more questions, many times doubling back to allow for greater insight into the original question. For example, discovery of interactions between previously unrelated pathways can lead to breakthroughs with regard to understanding of gene regulation. One such novel interaction and the subsequent discoveries this interaction spurred are discussed herein. Transposons, or “Jumping Genes” are mobile genetic elements found throughout all three major domains of life. Transposons comprise 44% of the human genome and possess the ability to move within the genome. This ability makes them an …

Color-Mediated Foraging By Pollinators: A Comparative Study Of Two Passionflower Butterflies At Lantana Camara, Gyanpriya Maharaj

Dissertations

Colorful floral signaling and resulting insect foraging behaviors have only been extensively examined in hymenopteran pollinators, especially bees, in comparison to flies, beetles, and butterflies regardless of their ecological importance. Therefore, my study provides novel information by focusing on foraging behaviors of adult passionflower butterflies, Heliconius melpomene and Dryas iulia, to the color changing flowers of Lantana camara. My dissertation which is divided into four chapters, aims to explore various aspects of color mediate foraging in passionflower butterflies by combining observations in the wild with controlled field and laboratory experiments. In the first chapter I reviewed flower color development and …

Historical Biogeography, Spatial Distribution, And Within-Host Interactions Of Avian Haemosporidian Parasites (Apicomplexa, Haemosporida), Leticia De Souza Soares

Dissertations

This dissertation addresses several aspects of the biogeography and evolution of avian malarial parasites (Haemosporida: Plasmodium and Haemoproteus), and the interactions of these pathogens with their hosts and other avian blood parasites. In Chapter 1, I investigate change in haemosporidian assemblages on the West Indies over millennial time scales, taking advantage of the historical isolation of islands by postglacial rising sea levels. I found that, the prevalence of parasite lineages is highly dynamic over periods from decades to thousands of years. Turnover of lineages requires more time than variation in lineage prevalence, suggesting that competitive exclusion of parasite lineages, likely …

Minority Middle And High School Students' Interest In Science: An Exploration Of Teachers' Perceptions, Caroline Makere

Dissertations

A high school teacher conducted a study about minority middle and high school students’ interest in science. The problem was to find out why African American and Hispanic students were showing very little interest in science. The researcher used four middle school science teachers and nine high school science teachers, all from inner city schools in a big city of the Midwest United States except for one middle school teacher from a nearby suburb. The participants answered a survey questionnaire followed with a face-to-face recorded interview. The findings of the study confirmed that students showed little interest in science due …

A Comparison Of Multipath And Conventional Neuromuscular Electrical Stimulation, Cody Brian Bremner

Dissertations

Neuromuscular electrical stimulation (NMES) is the use of an electrical current for the purpose of eliciting a muscular response, and these treatments are most often used clinically for the specific purpose of increasing quadriceps strength. It is commonly accepted that the effectiveness of NMES for this purpose is primarily determined by the NMES training intensity. However, spatially limited motor unit recruitment, fatigue and discomfort negatively impact NMES-induced torque, which subsequently reduces NMES training intensities. Due to the importance of NMES training intensity, a substantial amount of research has focused on strategies designed to increase NMES-induced torque production, as well as …

Examining The Combined Effects Of Dissolved Oxygen, Temperature, And Body Size On The Physiological Responses Of A Model Macrobenthic Polychaete Species, Capitella Teleta, Kelsey Burns Gillam

Dissertations

While the scientific community is in consensus that coastal systems are threatened by climate change, few climate change studies test the effects of more than one variable directly related to climate change. The dissolved oxygen (DO) levels of the ocean are currently subject to both global warming and eutrophication; 94% of all hypoxia zones are expected to experience >2°C increase by 2035. This dissertation aims to examine how a model organism responds to simultaneous thermal and DO stress involving four levels of DO (100%, 70%, 50%, and 20%) saturation and three temperatures (15°C, 20°C, and 25°C).

The polychaete, Capitella teleta …

Epidemiology Of White Spot Syndrome Virus In The Daggerblade Grass Shrimp (Palaemonetes Pugio) And The Gulf Sand Fiddler Crab (Uca Panacea), Muhammad

Dissertations

Ever since the first outbreaks of White spot syndrome virus (WSSV), which causes White Spot Disease (WSD), in Asia in the early 1990s, the pathogen has been a major constraint to the profitability of the shrimp aquaculture industry across the globe. WSSV has a broad host range and is routinely detected in wild decapod crustaceans. In the present study, two common species in the tidal salt marsh along the northern coast of the Gulf of Mexico, the daggerblade grass shrimp (Palaemonetes pugio) and the Gulf sand fiddler crab (Uca panacea), were investigated for their role as …

Evolution In Light Of Mitonuclear Landscapes: An Examination Of Mitochondrial Replacement In Killifish (Fundulus Spp.), Stephen D. Flanagan

Dissertations

The mitochondria are responsible for the bulk of energy production in eukaryotes. They possess their own genome that works in conjunction with the nuclear genome to accomplish the extraordinarily important task of energy conversion. When species hybridize there will be a mismatch in evolutionary histories between these two genomes. The deleterious interactions of these genomes have been studied in great detail (i.e. hybrid breakdown). However, little work has been conducted to understand the population genetic, and morphological consequences of wide-ranging replacement. The Fundulus notatus complex is comprised of 3 species: F. notatus, F. olivaceus, and F. euryzonus. …

A Microbiomic Approach To The Characterization Of The Impacts And Influences Of Viral, Bacterial, And Harmful Algal Bloom Toxins On The Bottlenose Dolphin, Corey David Russo

Dissertations

As apex predators that display high site fidelity Tursiops truncatus (bottlenose dolphin) are indicators of marine ecosystem health. Bottlenose dolphins, additionally, display pathogenesis and immune response similar to that of humans. Humans and coastal bottlenose dolphins, in particular, are constantly exposed to the same industrial, agricultural and domestic toxins and pathogens, contaminants and pollutants. Thus, studies on the bottlenose dolphin are also valuable in bridging the gap between ocean and human health. Bottlenose dolphins are susceptible to viral bacterial and toxin infection. Infection in the bottlenose dolphin manifests itself in the form of mass stranding events, unusual mortality events, chronic …

Electrogenerated Chemiluminescence Study Of Semiconductor Nanoparticles Towards Sensitive Detection Of Biomolecules, Yiliyasi Wusimanjiang

Dissertations

The main focus of this dissertation is to unfold the fundamental aspects of electrogenerated chemiluminescence (ECL) generation from semiconductor nanoparticles (also known as quantum dots or QDs) within different ECL systems. The ECL and photo-physical interactions between the CdTe QDs (λ_emission= ~760 nm) and the CdSe QDs (λ_emission= ~550 nm), as well as the effects of carbon nanotubes on ECL of QDs were separately investigated. Optimum experimental conditions for peptide bond formation on an electrode surface through EDC (1-ethyl-3-(-3-dimethylaminopropyl) carbodiimide hydrochloride)/NHS (N-Hydroxysulfosuccinimide) coupling were also revealed using cyclic voltammetry technique. Based on the information …

Investigating The Functional Role Of Tick Antioxidants In Hematophagy And Vector Competence, Deepak Kumar

Dissertations

Ticks are obligate hematophagous arthropods and harbor several pathogens which transmit various diseases to humans and their domesticated animals. Host blood- digestion in a tick midgut (MG) generates several reactive oxygen species (ROS), which are extremely toxic to essential macromolecules (e.g. DNA, proteins, and lipids) within the cell, resulting in high oxidative stress. Thus, this dissertation focuses on the questions of how tick homeostasis responds to high oxidative stress, and how ticks and their harbored pathogens survive the high surge of oxidative stress during blood digestion. We are specifically interested in the tick-pathogen, Rickettsia parkeri (R. parkeri, Rp), harbored by …

Investigations Of Storage Root Development In Cassava (Manihot Esculenta Crantz), Yeetoh Chaweewan

Dissertations

The tropical root crop cassava is cultivated for its large starchy storage roots. Understanding critical processes in root tuberization is essential if improvement programs are to secure future yields for farmers. Studies were undertaken to identify critical components of storage root development at the anatomical and gene expression levels. Two types of roots were identified from greenhouse-grown stem cuttings: basal roots, which develop from the stem cut end and are prolific in nature, and nodal roots, which originate from the region of the buried axillary bud. Only nodal roots develop to produce storage organs. Anatomical sectioning was performed to determine …

The Effect Of Auditory Stimulation On Sleep Disruption In West Indian Manatee (Trichechus Manatus Latirostris), Natalija Lace

Dissertations

Florida manatees inhabit waterways where motorized boats are common. Although manatee mortalities resulting from boat strikes are well documented, the effect of boat noise on some manatee behaviors, including rest, has not been investigated. This study focuses on rest behavior and used a playback experiment with four manatees at the Lowry Park Zoo in Florida. We tested their responses to playback stimuli of either boat noise, silence, or manatee calls. A playback trial was initiated when the focal animal showed behavioral characteristics of rest.

Results showed that rest was interrupted in response to the playback of boat noise for each …

Analysis Of The Intricacies Of Substrate Recognition Of High Mobility Group Proteins And Aminoacyl-Trna Synthetases Using Non-Cognate Substrates, Douglas Van Iverson Ii

Dissertations

The studies presented in section 1 (Chapters I-IV) focus on the design and development of nucleic acid four-way junctions (4WJs) to target a member of the high mobility group (HMG) proteins, the proinflammatory cytokine high mobility group box 1 protein (HMGB1). In the present study, hybrid PNA-DNA 4WJs based on a model DNA 4WJ were constructed to improve the thermal stability of 4WJs while maintaining strong binding affinity toward HMGB1. An electrophoretic mobility shift assay (EMSA) was used to examine the binding affinity of an isolated DNA binding domain of HMGB1, the HMGB1 b-box (HMGB1b), toward a set of PNA-DNA …

Ecological And Phenotypic Factors Influencing The Movement Dynamics Of The Blackspotted Topminnow, Fundulus Olivaceus, Scott Richard Clark

Dissertations

Movement of individuals throughout a landscape is a complex behavior that has important consequences on numerous ecological and evolutionary processes. Perhaps most notably is the relationship between movement and reproduction, as this has implicit ramifications on individual fitness and consequently, population level processes. Although this relationship has been theoretically and empirically demonstrated across a number of animal taxa, its role in fishes remains understudied and largely unknown. Using a series of outdoor mesocosms, in combination with a field study, I employed passive integrated transponder (PIT) tags to experimentally assess the sex-specific movement dynamics of a small-bodied, sexually-dimorphic stream fish, the …

Effects Of Human Disturbance On Physiology, Behavior, And Ornamentation In The Eastern Bluebird, Lauren Marjorie Gillespie

Dissertations

Overall, few studies have focused on anthropogenic disturbance on wildlife physiology. Research has typically focused on how environmentally contaminated areas or anthropogenic disturbance (e.g. noise, human activity) influences biodiversity, community structure and behavior of individual animals. However, understanding how disturbance influences some aspects of physiology can require sacrifice of the animal, prohibiting ecologically relevant measures of behavior and reproductive success. This research strives to examine covariation between testosterone (T) and corticosterone (CORT), plumage ornamentation, and behavior in two populations of eastern bluebirds (Sialia sialis) that differ in degree to which their habitat is modified by human activity.

In …

Supplemental Action Learning Workshops: Understanding The Effects Of Independent And Cooperative Workshops On Students’ Knowledge, Kathryn M. Morris

Dissertations

Community colleges enroll more than half of the undergraduate population in the United States, thereby retaining students of varying demographics with extracurricular demands differing from traditional four-year university students. Often in a collegiate lecture course, students are limited in their abilities to absorb and process information presented by their instructors due to content-specific cognitive gaps between the instructor and the student (Preszler, 2009). Research has shown implementation of instructor-facilitated action learning workshops as supplemental instruction may help bridge these cognitive gaps allowing better student conceptualization and dissemination of knowledge (Drake, 2001; Fullilove & Treisman, 1990; Preszler, 2009; Udovick et al., …

Lignocellulose As Carbon Source Promotes Bacterial Synergism And Reduces Antagonism, Yijie Deng

Dissertations

Lignocellulose decomposes slowly in nature because it consists of complex polymers resistant to enzymatic degradation by most organisms. Some bacteria are capable of producing cellulolytic enzymes but the way in which bacteria interact within a community to enhance degradation of the recalcitrant substrate is poorly understood. A better understanding of how bacterial interactions affect lignocellulose degradation would provide potential approaches to improve the efficiency of lignocellulose degradation for biofuel production.

To study whether bacterial interactions enhance lignocellulose degradation, I grew environmental bacterial isolates in mixed cultures and pure cultures. I found that bacterial synergism in mixed cultures was common in …

Ecology And Genetics Of Lungless Salamanders (Family Plethodontidae) In The Gulf Coastal Plain, Jennifer Yasmin Lamb

Dissertations

During the last half century, lungless salamanders (Family Plethodontidae) have been the subject of numerous studies in the fields of ecology and genetics. While most works have focused on the species-rich Eastern Highlands region, there has been a recent shift towards plethodontid assemblages within the Coastal Plain. The research presented herein applies hierarchical occupancy models and both mitochondrial and nuclear genes to address questions pertinent to the biology and conservation of plethodontids within the Gulf Coastal Plain. The results of a multi-species Bayesian single-season occupancy model indicated that two environmental gradients, upstream drainage area and stream drying, influenced the probability …

Transition Between Phases Of The Annual Cycle: Spring Migration To Breeding In Nearctic-Neotropical Songbirds, Kristen Marie Covino

Dissertations

Appropriate timing of each life-history stage is crucial for seasonally migratory species. The temporal constraints faced by migratory songbirds require that they overlap preparation for breeding with spring migration. However, previous work has focused primarily on male birds and has produced inconsistent results regarding the degree of overlap between these two life-history stages. I study the degree to which migrating male and female songbirds prepare for breeding throughout spring migration as they move towards their breeding grounds. Overall, male migrants show a significant degree of breeding preparation during spring migration as determined by circulating testosterone levels and their ability to …

Characterization Of Glycine Rich Proteins From The Salivary Glands Of The Lone Star Tick Amblyomma Americanum, Rebekah Lynn Bullard

Dissertations

Ticks are blood sucking arthropods that feed on living hosts for up to three weeks. The ticks secrete a multitude of pharmacologically active proteins into the host during feeding which allow the tick to avoid the host immune response, establish a blood pool, and form a firm attachment. The firm attachment is facilitated by the formation of a cement cone which surrounds the tick mouthparts and intertwine between the host skin layers. In this study, gene expression of 44 A. americanum genes was measured throughout the bloodmeal to reveal the differential expression of these genes. Each of the genes tested …

Screening Strawberry Clones For Anthracnose Disease Resistance Using Traditional Techniques And Molecular Markers, Melinda A. Miller-Butler

Dissertations

Cultivated strawberry, Fragaria x ananassa Duchesne, is host for many pathogens. One of the most destructive diseases of strawberry is anthracnose, whose symptoms include fruit rot, leaf and petiole lesions, crown rot, wilt, and death. Three species of Colletotrichum are considered causative agents of anthracnose diseases of strawberry. Colletotrichum acutatum causes anthracnose fruit rot, has a broad host range, and occurs in most areas of the world where strawberries are grown. Colletotrichum fragariae, the primary causal fungus of anthracnose crown rot, may infect all aboveground parts of the strawberry plant, and has restricted host and geographic ranges. Colletotrichum gloeosporioides …

A Comparative Study Of Isolation In Headwater Fishes, Bjorn Victor Schmidt

Dissertations

Headwater resident fishes may be prone to a high rate of population fragmentation within river networks because large streams have habitat conditions outside of their preferred ecological niche and may limit gene flow in the dendritic ecological network. To investigate patterns of population structure, asymmetrical gene flow, and influences on genetic distance and isolation from connecting habitat pathways, species specific ecological traits, and basin scale characteristics, a multi-species, multi-regional study was performed. Six headwater species of fish from four taxonomic groupings were sampled for genetic material in three regions of paired neighbor drainages and then genotyped for eight microsatellite loci. …

Stopover Ecology Of Ruby-Throated Hummingbirds (Archilochus Colubris) During Autumn Migration, Theodore Joseph Zenzal Jr

Dissertations

The Ruby-throated Hummingbird (Archilochus colubris) is one of the smallest Nearctic-Neotropical migrants and the only species of hummingbird that breeds in Eastern North America, yet few studies have investigated the biology of Ruby-throated Hummingbirds when they stopover during migration. Given their small size, high metabolism, aggression, and specialized diet, hummingbirds may represent a migrant that operates on the physiological edge. Therefore it is important to understand the factors that influence their stopover as well as the decision to resume migration. Towards this end, Ruby-throated Hummingbirds were captured during autumn migration along the northern coast of the Gulf of Mexico to …

Assessing The Impact Of Historical Story Telling On Student Learning Of Natural Selection, Janice Marie Fulford

Dissertations

Research suggests that because of its historical nature, the learning of evolutionary biology is problematic compared to that of other science disciplines. While explanations used in historical sciences often employ historical narratives, which are distinct from narratives in other contexts, such as stories, the two types of narratives have structural similarities that suggest the potential role of stories based in the history of science for the teaching of evolutionary biology. Stephen Klassen, a prominent science educator, has studied how stories from the history of physics can promote the learning of and attitudes towards science. Klassen’s pioneering work identifies structural components …

Sex Differences In Stroke Recovery: Synaptic Proteins And The Growth Inhibitory Protein Nogo A, Vincent Joseph Borkowski

Dissertations

Ischemic stroke is a major world-wide health problem, resulting in death and disability especially in the older population. A sex difference exists in functional recovery post-stroke, with post-menopausal women having worse functional outcome as compared to age-matched men. Although the mechanisms underlying this sex difference are not entirely clear, it is recommended that any potential therapy for stroke recovery be tested in pre-clinical models including both male and females in order to determine the efficacy of the proposed treatment on the entire population. We have reported a novel therapy to enhance brain plasticity and improve functional recovery after stroke in …

Critical Role Of C-Jun N-Terminal Kinase Signaling In Binge Alcohol-Driven Atrial Arrhythmic Remodeling, Jiajie Yan Yan

Dissertations

Holiday Heart Syndrome (HHS) is cardiac arrhythmia induced by binge alcohol consumption, a drinking pattern affects 38 million adults in our society. Atrial fibrillation (AF) is the most frequently diagnosed arrhythmia in HHS and causes significant morbidity and mortality. Despite the intensive prevention effort nationwide, the binge drinking population keeps rising. However, no effective treatment strategies are available for binge drinking induced AF due to the unknown underlying mechanisms. In this thesis, I aim to elucidate the mechanisms of binge alcohol-promoted atrial arrhythmogenicity by using a mouse model of repeated binge alcohol exposure established in the Ai Lab.

The Ai …

The Amino Terminal Region Of Cardiac Myosin Binding Protein-C Is Necessary For Cardiac Function, Thomas Lawrence Lynch

Dissertations

Cardiac myosin binding protein-C (cMyBP-C) is a thick filament-associated protein that has been suggested to regulate cardiac contraction via its amino terminal (N’) region. Following ischemic injury to the heart, cMyBP-C is cleaved into a predominant N’ fragment consisting of domains C0 through C1 and the first 17 residues of the M-domain that is referred to as C0-C1f. However, the necessity of the N’-C0-C1f region of cMyBP-C in regulating cardiac function in vivo has not been elucidated. I hypothesized that the N’-C0-C1f region of cMyBP-C is critical for normal cardiac function in vivo. To test this hypothesis, transgenic (TG) mice …