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Genetics and Genomics

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Faculty Scholarship

2009

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Target Selection And Annotation For The Structural Genomics Of The Amidohydrolase And Enolase Superfamilies, Xiaojing Zheng, Mark R. Chance Feb 2009

Target Selection And Annotation For The Structural Genomics Of The Amidohydrolase And Enolase Superfamilies, Xiaojing Zheng, Mark R. Chance

Faculty Scholarship

To study the substrate specificity of enzymes, we use the amidohydrolase and enolase superfamilies as model systems; members of these superfamilies share a common TIM barrel fold and catalyze a wide range of chemical reactions. Here, we describe a collaboration between the Enzyme Specificity Consortium (ENSPEC) and the New York SGX Research Center for Structural Genomics (NYSGXRC) that aims to maximize the structural coverage of the amidohydrolase and enolase superfamilies. Using sequence- and structure-based protein comparisons, we first selected 535 target proteins from a variety of genomes for high-throughput structure determination by X-ray crystallography; 63 of these targets were not …