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University of Central Florida

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Computational biology

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Machine Learning Algorithms To Study Multi-Modal Data For Computational Biology, Khandakar Tanvir Ahmed Jan 2024

Machine Learning Algorithms To Study Multi-Modal Data For Computational Biology, Khandakar Tanvir Ahmed

Graduate Thesis and Dissertation 2023-2024

Advancements in high-throughput technologies have led to an exponential increase in the generation of multi-modal data in computational biology. These datasets, comprising diverse biological measurements such as genomics, transcriptomics, proteomics, metabolomics, and imaging data, offer a comprehensive view of biological systems at various levels of complexity. However, integrating and analyzing such heterogeneous data present significant challenges due to differences in data modalities, scales, and noise levels. Another challenge for multi-modal analysis is the complex interaction network that the modalities share. Understanding the intricate interplay between different biological modalities is essential for unraveling the underlying mechanisms of complex biological processes, including …


Computational Methods For Comparative Non-Coding Rna Analysis: From Structural Motif Identification To Genome-Wide Functional Classification, Cuncong Zhong Jan 2013

Computational Methods For Comparative Non-Coding Rna Analysis: From Structural Motif Identification To Genome-Wide Functional Classification, Cuncong Zhong

Electronic Theses and Dissertations

Recent advances in biological research point out that many ribonucleic acids (RNAs) are transcribed from the genome to perform a variety of cellular functions, rather than merely acting as information carriers for protein synthesis. These RNAs are usually referred to as the non-coding RNAs (ncRNAs). The versatile regulation mechanisms and functionalities of the ncRNAs contribute to the amazing complexity of the biological system. The ncRNAs perform their biological functions by folding into specific structures. In this case, the comparative study of the ncRNA structures is key to the inference of their molecular and cellular functions. We are especially interested in …