Digital Commons Network^™

Effects Of Prescribed Burns On Grassland Breeding Birds At Mississippi Sandhill Crane National Wildlife Refuge, Elizabeth A. Ruffman

University of New Orleans Theses and Dissertations

There has been a critical decline in grassland bird populations due to habitat fragmentation and deterioration, and suppression of natural fires. Alteration of the disturbance cycle may lead to changes in vegetation structure and thus habitat suitability for breeding grassland birds. Management practices at the Mississippi Sandhill Crane National Wildlife Refuge, including the use of prescribed fire, are in need of evaluation. My study asked what frequency of prescribed burns is necessary to support breeding grassland birds and whether vegetation structure varies among burn units. In this study, bird abundance and species richness did not differ significantly among burn units …

Wood Decomposition In A Warmer World, Emily Elizabeth Austin

Doctoral Dissertations

Climatic warming is altering species distributions and ecosystem functions across the globe. Wood is an important carbon pool and the fungal communities in wood are relatively simple compared to those in soil. These factors make decomposing wood an ideal system for exploring the influence of decomposer community on the response of decomposition to warming. My research has focused on the effects of warming wood decomposition rates and wood decomposing communities. Using field and lab- based manipulative experiments and field observations I explore the influence of tree species, wood decomposition stage, geography and warming on fungal community structure and activity. In …

Liana Impacts On Carbon Cycling, Storage And Sequestration In Tropical Forests, Geertje M. Van Der Heijden, Stefan A. Schnitzer, Jennifer S. Powers, Oliver L. Phillips

Biological Sciences Faculty Research and Publications

Mature tropical forests sequester large quantities of atmospheric CO2, which they store as plant biomass. These forests are changing however, including an increase in liana abundance and biomass over recent decades in Neotropical forests. We ask here how this increase in lianas might impact the tropical forest carbon cycle and their capacity for carbon storage and sequestration. Lianas reduce tree growth, survival, and leaf productivity; however, lianas also invest significantly in leaf production, and the increase in lianas could conceivably offset liana‐induced reductions in tree canopy productivity with no adverse effects to the forest‐level canopy productivity. By contrast, lianas decrease …

Accounting For False Positive Detection Error Induced By Transient Individuals, Chris Sutherland, D Elston, X. Lambin

Chris Sutherland

Incorporating Satellite Derived Cloud Climatologies To Improve High Resolution Interpolation Of Daily Precipitation., Adam M. Wilson, Benoit Parmentier, Brian Mcgill, Rob Guralnick, Walter Jetz

Yale Day of Data

Conservation of biodiversity demands comprehension of evolutionary and ecological patterns and processes that occur over vast spatial and temporal scales. A central goal of ecology is to understand the factors that control the spatial distribution of species and this has become even more important in the face of climate change. However, at global scales there can be enormous uncertainty in environmental data used to model species distributions. Even ‘simple’ metrics such as mean annual precipitation are difficult to estimate in areas with few weather stations and available data sets do not quantify uncertainty in these surfaces. We are developing a …

Environmental Influences On Sex Ratio And Spatial Distribution Of Dioecious Morella Cerifera L. On A Virginia Barrier Island., Molly Hokkanen

Theses and Dissertations

For dioecious plant species, sex ratios within a population depend on multiple environmental and life history characteristics. Sex ratio is an indicator of population health and can be a predictor for genetic bottlenecking. My study established the previously unknown sex ratio for the shrub, Morella cerifera, on a Virginia barrier island. The ratio was compared with multiple environmental and reproductive traits to determine their potential influence on sex determination and/or distribution of male and female plants. Multivariate analyses were used to identify relationships between sex, sex ratio and environmental drivers. The sex ratio for M. cerifera changed depending on scale. …

Aspergillosis Of Pseudopterogorgia Americana: Increased Host Range Of Aspergillus Sydowii From The Wider Caribbean, Garriet W. Smith

Journal of the South Carolina Academy of Science

Reports of gorgonian diseases have been increasing in the past few years,but, with the exception of Gorgonia spp., the etiological agents responsible are generally unknown. In the summer of 1999, populations of Pseudopterogorgia americana were observed with lesions and galls, somewhat similar to Aspergillus sydowii infections on Gorgonia ventalina, in Bermuda. Surveys of three sites were made, repeated the following two years, and compared with sites in the Bahamas. Microscopic observations of affected tissue and subsequent pure culture studies indicated the pathogen was also A. sydowii. Over half of the colonies at the Bahamas site were affected, but …

Mechanics, Diversity, And Ecology Of Gecko Adhesion, Travis Jay Hagey

Biology

The question of why animals are shaped the way they are has intrigued scientists for hundreds of years. Studies of ecological morphology (the relationship between an organism’s form, function, and environment) often bridge multiple disciplines including biomechanics, ecology, phylogenetics, and comparative methods. In this dissertation, I gathered data and tested hypotheses that considered the link between morphology and performance and the relationship between performance and ecology. I focused my research on the adhesive abilities of geckos. Geckos are an understudied, diverse group of lizards, well known for their adhesive toe pads. I propose that geckos are an excellent group to …

The River Otter In Idaho: Reproductive And Population Parameters And Liver Concentrations Of Environmental Contaminants, Gina Diggs

Boise State University Theses and Dissertations

To obtain current data on the North American river otter (Lontra canadensis) population in Idaho, licensed trappers were mandated to surrender river otter carcasses through provisions of the Idaho Department of Fish and Game’s mandatory harvest report. Throughout the 2002-2003 and 2003-2004 trapping seasons, 237 river otter carcasses were collected. Necropsies were performed to assess age and sex, general body condition, reproductive rates, and concentrations of environmental contaminants in the livers. Reproductive rates were determined by counting corpora lutea and blastocysts in female river otters. Livers were dissected and concentrations of environmental contaminants were determined for the following …

Presence And Function Of Tetrodotoxin In Terrestrial Vertebrates And Invertebrates, Amber N. Stokes

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Tetrodotoxin (TTX) is a potent neurotoxin found in a variety of species. This toxin has long been of concern to human health as it is found in puffer fish, which are a delicacy in Japan. Since the distribution of this toxin is so great, there are many questions regarding the evolution and ecology of organisms that have TTX. My research has focused on further investigating three topics with this research: production, predation, and identification of novel TTX bearing taxa. In order to perform this research I first refined a Competitive Inhibition Enzymatic Immunoassay methodology to quantify levels of TTX in …

Population Demographics And Genetics Of Spix's Disk-Winged Bat: Insights Regarding Survival, Mate Choice, Gene Flow And Effective Population Size, Michael Buchalski

Dissertations

Simultaneous study of the demographics and genetics of populations are relatively rare within the literature, despite insights their combined use offers regarding the life history, ecology, and evolution of species. Here I take a comprehensive approach, using capture-recapture data, polymorphic microsatellite markers, and various modeling techniques to examine the demographics and genetics of multiple local populations of Spix’s disk-winged bat (Thyroptera tricolor) in southwestern Costa Rica. T. tricolor is a highly gregarious, neotropical bat species known to form kin-based social groups with high retention of offspring of both sexes. The implications of this highly unusual social structure for …

Movement And Habitat Use Of The Snapping Turtle In An Urban Landscape, Travis J. Ryan, William A. Peterman, Jessica D. Stephens, Sean C. Sterrett

Scholarship and Professional Work - LAS

In order to effectively manage urban habitats, it is important to incorporate the spatial ecology and habitat use of the species utilizing them. Our previous studies have shown that the distribution of upland habitats surrounding a highly urbanized wetland habitat, the Central Canal (Indianapolis, IN, USA) influences the distribution of map turtles (Graptemys geographica) and red-eared sliders (Trachemys scripta) during both the active season and hibernation. In this study we detail the movements and habitat use of another prominent member of the Central Canal turtle assemblage, the common snapping turtle, Chelydra serpentina. We find the same …

The Distribution Of Fruit And Seed Toxicity During Development For Eleven Neotropical Trees And Vines, Noelle G. Beckman

Biology Faculty Publications

Secondary compounds in fruit mediate interactions with natural enemies and seed dispersers, influencing plant survival and species distributions. The functions of secondary metabolites in plant defenses have been well-studied in green tissues, but not in reproductive structures of plants. In this study, the distribution of toxicity within plants was quantified and its influence on seed survival was determined in Central Panama. To investigate patterns of allocation to chemical defenses and shifts in allocation with fruit development, I quantified variation in toxicity between immature and mature fruit and between the seed and pericarp for eleven species. Toxicity of seed and pericarp …

Effects Of Multiple Ecological Drivers On Recruitment And Succession Of Coral Reef Macroalgal Communities, Alain Duran

FIU Electronic Theses and Dissertations

The study evaluated the effects of herbivory pressure, nutrient availability and potential propagule supply on recruitment and succession of coral reef macroalgal communities. Recruitment and succession tiles were placed in a nutrient-herbivory factorial experiment and macroalgal abundances were evaluated through time. Proportional abundances of macroalgal form-functional groups on recruitment and succession tiles were similar to field established communities within treatments, evidencing possible effects of adult macroalgae as propagule supply. Macroalgal abundance of recruitment tiles increased with nutrient loading and herbivory reduction combined whereas on succession tiles nutrient loading increased abundance of articulated-calcareous only when herbivores were excluded. Macroalgal field established …

Bactericera Cockerelli: Range Expansion, Candidatus Liberibacter Solanacaerum Detection, And Microbial Community Analysis, Alex Arp

Biology Theses

The potato psyllid (Bactericera cockerelli) is an emerging pest of solanacious crops. Traditionally their range expanded from Guatemala north through the central United States and into southern California. Recent expansions have led to potato psyllids residing as far south as Nicaragua and as for north as Washington State. Potato psyllids were also accidentally imported into New Zealand. These expansions are alarming because potato psyllids transmit Candidatus Liberibacter solanacaerum (Lso), the bacteria associated with Zebra Chip disease in potato, which results in millions of dollars in damages annually. In this study, potato psyllid and Zebra Chip range expansion into Central America …

Ground-Truthing Maxent In East Texas Rivers, David F. Ford

Biology Theses

Unionid mussels are a guild of freshwater, sedentary filter-feeders, which play a critical role in freshwater systems. Mussels are currently experiencing a global decline in both species richness and abundance, due to invasive species, human alteration of water systems, and climate change. In North America, which is considered to have the highest global diversity of bivalve species, native mussels are currently declining rapidly with at least 37 species considered to already be extinct. If extant mussel species are to be preserved, then it is vital that conservation efforts be prioritized towards areas in which they are likely to be found. …

The Identity Of Rana Margaritifera Laurenti, 1768 (Anura, Bufonidae), Esteban O. Lavilla, Ulisses Caramaschi, José A. Langone, José P. Pombal Jr., Rafael O. De Sá

Biology Faculty Publications

Rana margaritifera was described by Laurenti in 1768 and currently is associated to the genus Rhinella, under the combination Rhinella margaritifera. Currently, the R. margaritifera species group consists of 16 recognized species. Further-more, many additional species have been suggested to exist in this group which highlights the ambiguity surrounding the identity of Rhinella margaritifera and impend further description of the species in this group. After an exhaustive bibliographic review, we concluded that the recent designation of a lectotype for R. margaritifera is invalid according with Art. 73, ICZN, 1999. Herein, we designate and provide the description of a …

A Data-Intensive Assessment Of The Species Abundance Distribution, Elita Baldridge

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

One of the most commonly observed patterns in ecology is the fact that at most locations there are a large number of relatively rare species, composed of only a few individuals per species, and a small number of relatively common species. This pattern of commonness and rarity is quantified by the species abundance distribution. As one of the most commonly observed patterns in ecology, it has been studied intensively for over 100 years.

A major emphasis of this research has been developing models to try to understand the forces that generate such a general pattern. As a result, there are …

An Environmental History Of The Bear River Range, 1860-1910, Bradley Paul Hansen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The study of environmental history suggests that nature and culture change all the time, but that the rate and scale of such change can vary enormously. During the late 19th and early 20th centuries, Anglo settlement in the American West transformed landscapes and ecologies, creating new and complex environmental problems. This transformation was particularly impressive in Cache Valley, Utah's Bear River Range. From 1860 to 1910, Mormon settlers overused or misused the Bear River Range's lumber, grazing forage, wild game, and water resources and introduced invasive plant and animal species throughout the area.

By the turn of the 20th century, …

Examining Mitochondrial Genetic Diversity In A Population Of Eastern Hognose Snakes (Heterodon Platirhinos) In Cape Cod, Ma, Stephanie R. Parelli

Theses, Dissertations and Culminating Projects

The Eastern Hognose snake (Heterodon platirhinos) is a relatively poorly studied species found in the eastern half of the United States from southern New England and Ontario south along the Atlantic coast to Florida and west to Texas, Kansas, Nebraska, and South Dakota. In the Northeastern part of their range they are considered to be a species of regional conservation concern by the Northeast Endangered Species and Wildlife Diversity Technical Committee. They are protected by conservation measures in the states of Rhode Island, Connecticut, and Massachusetts, and are listed as endangered by the state of New Hampshire. The purpose of …

Variations In Phenotypic Plasticity And Fluctuating Asymmetry Of Leaf Morphology Of Three Quercus (Oak) Species In Response To Environmental Factors, Joseph Kusi

Electronic Theses and Dissertations

Leaf morphology of Quercus (oak) species is highly variable and complicated confounded with phenotypic plasticity and fluctuating asymmetry (FA). However, the study of variation is mostly limited to leaf morphology. This study was extended to plasticity and FA variations in Q. alba (white oak), Q. palustris (pin oak), and Q. velutina (black oak). It was hypothesized that light exposure, individual trees, leaf position, and other leaf traits will influence variation in these species. Leaves were sampled from trees of these species and their morphological traits were measured. Absolute asymmetry of leaf width and area were determined and plasticity of each …

Influence Of Wind Turbines On Mammalian Occupancy Patterns, Brian P. Tanis

Master's Theses

Wind energy is among the most rapidly growing energy industries in the United States, with support for development coming from both state and federal governments. While the industry depicts an environmentally friendly image, the addition of infrastructure associated with wind farms alters landscapes in novel ways. Numerous studies have documented impacts wind turbines have on bird and bat mortality; however, far less attention has been directed towards responses of non-volant, terrestrial organisms. Mammalian mesocarnivores are model organisms to assess the alteration of communities surrounding wind turbines as they respond to addition of turbines and human activity, addition and improvement of …

Activities Of Methionine-Γ-Lyase In The Acidophilic Archaeon “Ferroplasma Acidarmanus” Strain Fer1, M. A. Khan, Madeline M. Lopez-Munoz, Charles W. Kaspar, Kai F. Hung

Kai F. Hung

Biogeochemical processes on exposed pyrite ores result in extremely high levels of sulfuric acid at these locations. Acidophiles that thrive in these conditions must overcome significant challenges, including an environment with proton concentrations at pH 3 or below. The role of sulfur metabolism in the archaeon “Ferroplasma acidarmanus” strain fer1’s ability to thrive in this environment was investigated due to its growth-dependent production of methanethiol, a volatile organic sulfur compound. Two putative sequences for methionine- γ-lyase (EC 4.4.1.11), an enzyme known to carry out α,γ-elimination on L-methionine to produce methanethiol, were identified in fer1. Bioinformatic analyses identified a conserved pyridoxal-5′-phosphate …

Activities Of Methionine-Γ-Lyase In The Acidophilic Archaeon “Ferroplasma Acidarmanus” Strain Fer1, M. A. Khan, Madeline M. Lopez-Munoz, Charles W. Kaspar, Kai F. Hung

Faculty Research & Creative Activity

Biogeochemical processes on exposed pyrite ores result in extremely high levels of sulfuric acid at these locations. Acidophiles that thrive in these conditions must overcome significant challenges, including an environment with proton concentrations at pH 3 or below. The role of sulfur metabolism in the archaeon “Ferroplasma acidarmanus” strain fer1’s ability to thrive in this environment was investigated due to its growth-dependent production of methanethiol, a volatile organic sulfur compound. Two putative sequences for methionine- γ-lyase (EC 4.4.1.11), an enzyme known to carry out α,γ-elimination on L-methionine to produce methanethiol, were identified in fer1. Bioinformatic analyses identified a conserved pyridoxal-5′-phosphate …

Functional Annotation And Comparative Analysis Of A Zygopteran Transcriptome, Alexander G. Shanku, Mark A. Mcpeek, Andrew D. Kern

Dartmouth Scholarship

In this paper we present a de novo assembly of the transcriptome of the damselfly (Enallagma hageni) through the use of 454 pyrosequencing. E. hageni is a member of the suborder Zygoptera, in the order Odonata, and Odonata organisms form the basal lineage of the winged insects (Pterygota). To date, sequence data used in phylogenetic analysis of Enallagma species have been derived from either mitochondrial DNA or ribosomal nuclear DNA. This Enallagma transcriptome contained 31,661 contigs that were assembled and translated into 14,813 individual open reading frames. Using these data, we constructed an extensive dataset of 634 orthologous nuclear protein-encoding …

A Pharm-Ecological Perspective Of Terrestrial And Aquatic Plant-Herbivore Interactions, Jennifer Sorensen Forbey, M. Denise Dearing, Elisabeth M. Gross, Colin M. Orians, Erik E. Sotka, William J. Foley

Biology Faculty Publications and Presentations

We describe some recent themes in the nutritional and chemical ecology of herbivores and the importance of a broad pharmacological view of plant nutrients and chemical defenses that we integrate as “Pharm-ecology”. The central role that dose, concentration, and response to plant components (nutrients and secondary metabolites) play in herbivore foraging behavior argues for broader application of approaches derived from pharmacology to both terrestrial and aquatic plant-herbivore systems. We describe how concepts of pharmacokinetics and pharmacodynamics are used to better understand the foraging phenotype of herbivores relative to nutrient and secondary metabolites in food. Implementing these concepts into the field …

Condition-Dependent Auditory Processing In The Round Goby (Neogobius Melanostomus): Links To Sex, Reproductive Condition And Female Estrogen Levels, Jeffrey N. Zeyl, Oliver P. Love, Dennis M. Higgs

Integrative Biology Publications

Neural responses to sensory stimuli often differ between sexes, vary seasonally, and can be regulated by endocrine activity, but the ecological and physiological mechanisms driving such patterns are not well understood. The current study examined how auditory function in the round goby (Neogobius melanostomus), a vocal teleost, co-varied with sex, reproductive condition and female plasma 17β-estradiol level. Auditory evoked potentials were collected in response to tone pips (100-600 Hz) and a natural round goby pulse vocalization. Additionally, saccule hair cell densities were compared across reproductive groups. Auditory threshold was evaluated in terms of pressure and particle acceleration, and response amplitude …

Nitrogen Uptake Strategies Of Edaphically Specialized Bornean Tree Species, Sabrina E. Russo, Amy Kochsiek, Jocelyn Olney, Lauren Thompson, Amy E. Miller, Sylvester Tan

School of Biological Sciences: Faculty Publications

The association of tree species with particular soil types contributes to high b diversity in forests, but the mechanisms producing such distributions are still debated. Soil nitrogen (N) often limits growth and occurs in differentially available chemical forms. In a Bornean forest where tree species composition changes dramatically along a soil gradient varying in supplies of different N-forms, we investigated whether tree species’ N-uptake and soil specialization strategies covaried. We analyzed foliar ¹⁵N natural abundance for a total of 216 tree species on clay or sandy loam (the soils at the gradient’s extremes) and conducted a ¹⁵N-tracer experiment …

Separation Strategies For Invertebrate Dormant Stages Contained In Sediment, Elizabeta Briski, Sarah A. A. Bailey, Hugh J. Macisaac

Biological Sciences Publications

No abstract provided.

Diversification Under Sexual Selection: The Relative Roles Of Mate Preference Strength And The Degree Of Divergence In Mate Preferences, Rafael L. Rodríguez, Janette W. Boughman, David A. Gray, Eileen A. Hebets, Gerlinde Höbel, Laurel B. Symes

Eileen Hebets Publications

The contribution of sexual selection to diversification remains poorly understood after decades of research. This may be in part because studies have focused predominantly on the strength of sexual selection, which offers an incomplete view of selection regimes. By contrast, students of natural selection focus on environmental differences that help compare selection regimes across populations. To ask how this disparity in focus may affect the conclusions of evolutionary research, we relate the amount of diversification in mating displays to quantitative descriptions of the strength and the amount of divergence in mate preferences across a diverse set of case studies of …