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Articles 1 - 11 of 11
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Microbial Community Characterization And Pathogen Profiling Of Land-Based Aquaculture Systems Using Culture-Based And Molecular-Based Fingerprinting Techniques, Nicole S. Kteily
Microbial Community Characterization And Pathogen Profiling Of Land-Based Aquaculture Systems Using Culture-Based And Molecular-Based Fingerprinting Techniques, Nicole S. Kteily
Theses and Dissertations (Comprehensive)
The growing worldwide demand for fish production has prompted research towards intensive aquaculture. Innovative system designs, such as recirculating and flow-through aquaculture systems, have been developed to improve the efficiency and sustainability of intensive aquaculture practices. These LBAS systems exhibit a wide range of spatial and temporal heterogeneity. Although such heterogeneity suggests the potential for culture water to support a diverse and spatially complex assortment of microorganisms, there is a lack of information regarding the overall diversity and composition of microbial communities (including pathogens) in the different compartments of these systems. To better understand the diversity and functionality of microbial …
The Role Of Body Size On The Outcome Of Mating Interactions In Drosophila Melanogaster, Adam C. Lounsbury
The Role Of Body Size On The Outcome Of Mating Interactions In Drosophila Melanogaster, Adam C. Lounsbury
Theses and Dissertations (Comprehensive)
Sexual selection is the process by which some individuals produce more and/or better quality offspring than others because they are better at securing mates. While this may be accomplished by defeating same-sex rivals (intrasexual selection), individuals of one sex (typically females) may also “decide” on the suitability of individuals of the opposite sex (typically males), resulting in intersexual selection on attractive traits. While a great deal of scrutiny has focused on how sexual selection influences male display traits, much less scrutiny has been directed toward the factors underlying female preference, including genetic variation, as well as the extent to which …
Characterizing Dsrna Production In Virus-Infected Fish Cells, Amal Brek Aloufi
Characterizing Dsrna Production In Virus-Infected Fish Cells, Amal Brek Aloufi
Theses and Dissertations (Comprehensive)
Viral dsRNA is produced by almost all viruses sometime during their replicative cycle. These viral nucleic acids are potent inducers of both innate and adaptive immune responses, and are therefore considered important immuno-modulators. Previous studies have shown that viruses produce dsRNA when replicating in mammalian cells; however, to date no one has demonstrated viral dsRNA production in virus infected fish cells. Therefore, the goal of this study is to investigate dsRNA production by fish viruses in fish cells, verifying production and performing initial characterization of the dsRNA molecules being produced. Three different rainbow trout cell lines were used in this …
Distribution And Elimination Of 3-Trifluoromethyl-4-Nitrophenol (Tfm) By Sea Lamprey (Petromyzon Marinus) And Non-Target, Rainbow Trout (Oncorhynchus Mykiss) And Lake Sturgeon (Acipenser Fulvescens), Michael W. Le Clair
Theses and Dissertations (Comprehensive)
The pesticide, 3-trifluoromethyl-4-nitrophenol (TFM), has been highly successful in the control of sea lamprey (Petromyzon marinus) populations in the Great Lakes. Treatments with TFM involve applying it to streams, where it targets larval sea lamprey which live burrowed in the stream substrate. While the toxic mechanism of TFM has been elucidated, and its effects on sea lamprey described, its effects on non-target fish species such as rainbow trout (Oncorhynchus mykiss) and lake sturgeon (Acipenser fulvescens) are not as well understood. The present work demonstrated that rainbow trout show a great capacity to detoxify the lampricide using glucuronidation, when exposed to …
A Structure-Function Analysis Of The Arabidopsis Chloroplast Import Protein Attic20, James H. Campbell
A Structure-Function Analysis Of The Arabidopsis Chloroplast Import Protein Attic20, James H. Campbell
Theses and Dissertations (Comprehensive)
Arabidopsis thaliana protein Tic20 (atTic20) is a member of the translocon at the inner envelope membrane of chloroplasts. Evidence to date suggests it is part of the main preprotein conducting aperture in the complex, but its exact role is still debated. To help characterize its role, a protocol optimizing yield and purity of recombinantly expressed atTic20 was developed, and a series of experiments was performed to examine its secondary structure and its ability to interact with chloroplast transit peptides. The attempt to increase protein yield was successful, with growth at 20oC in the auto-inducing media ZYP-5052 showing the …
Comparative Analysis Of Selected Model Species Used In Intervertebral Disc Research, Lauren A. Monaco
Comparative Analysis Of Selected Model Species Used In Intervertebral Disc Research, Lauren A. Monaco
Theses and Dissertations (Comprehensive)
Animal models are frequently used in place of human specimens to study the progression of injury and/or disease of the intervertebral disc (IVD). This project aimed to compare the geometry, hydration, histology, and mechanical properties of selected animal models: bovine (cow) tail, porcine (pig) lumbar, and ovine (sheep) lumbar IVDs. X-ray images were taken and used to determine the anterior, posterior, and lateral IVD and vertebral heights in order to calculate IVD: vertebral height ratios. Water content was determined by comparing IVD weight before (wet weight) and after (dry weight) 24 hours of incubation at 65°C. Mechanical properties …
Comparative Study Of Factors Influencing Seed Germination And Seedling Longevity In Cuscuta (Dodder, Convolvulaceae), Behrang Behdarvandi
Comparative Study Of Factors Influencing Seed Germination And Seedling Longevity In Cuscuta (Dodder, Convolvulaceae), Behrang Behdarvandi
Theses and Dissertations (Comprehensive)
Cuscuta (dodder), the only parasitic genus of Convolvulaceae family, is a significant plant from ecological, economical, and conservational point of views. The genus consists of c. 200 described species with wide ranges of ecological distributions. Cuscuta spp. are categorized as stem parasitic plants with reduced (or lost) photosynthesis-related genes. The filamentous coiled embryo, embedded in the endosperm, lacks cotyledons and is covered with a multiple-layered seed coat. The seedlings carry a vestigial root-like organ which is not considered a ‘true’ functional root. Members of the genus differ in their germination rate and seedling survival. It is known that seed …
Diversity And Evolution Of The Multicellular Protuberances In Cuscuta (Convolvulaceae) And The Function Of The Stomatiferous Protuberances In Cuscuta Subgenus Grammica, Courtney J. Clayson
Diversity And Evolution Of The Multicellular Protuberances In Cuscuta (Convolvulaceae) And The Function Of The Stomatiferous Protuberances In Cuscuta Subgenus Grammica, Courtney J. Clayson
Theses and Dissertations (Comprehensive)
Cuscuta (Convolvulaceae), also known as the dodders, is a holoparasitic genus comprised of ca. 200 species grouped into four subgenera: Monogynella, Cuscuta, Pachystigma, and Grammica. The presence of unique multicellular structures, referred to as stomatiferous protuberances (SPs), was reported on the stems of subgenus Grammica over a century ago and was forgotten until similar SPs were observed on the flowers of several new Grammica species. The stems and flowers were examined in 136 Cuscuta taxa, and SPs were discovered on all of the haustorial stems of the species in the subgenus Grammica, as well as …
Effects Of Salinity And Dissolved Organic Matter On Cu Toxicity To Americamysis Bahia In Estuarine Environments, Rabia Nasir
Effects Of Salinity And Dissolved Organic Matter On Cu Toxicity To Americamysis Bahia In Estuarine Environments, Rabia Nasir
Theses and Dissertations (Comprehensive)
As salinity increases the geochemical speciation of Cu is altered as a result of organic/inorganic complexation/competition. Such salinity changes may further challenge the osmoregulatory capabilities of euryhaline organisms. This chemical-biological interaction complicates the understanding of the impacts of Cu in estuarine waters. Dissolved organic matter (DOM) has been widely established to be an important modifier of Cu toxicity in freshwaters however its effectiveness in modulating Cu toxicity across the range of salinities that occur in estuarine conditions has not been studied in a systematic manner. Site to site differences in DOM quality with respect to the potential for toxicity mitigation …
Genome Jigsaw: Implications Of 16s Ribosomal Rna Gene Fragment Position For Bacterial Species Identification, Jennifer Mitchell
Genome Jigsaw: Implications Of 16s Ribosomal Rna Gene Fragment Position For Bacterial Species Identification, Jennifer Mitchell
Theses and Dissertations (Comprehensive)
The 16S rRNA gene is present within all bacteria, and contains nine variable regions interspersed within conserved regions of the gene. While conserved regions remain mostly constant over time, variable regions can be used for taxonomic identification purposes. Current methodologies for characterizing microbial communities, such as those used to study the human microbiome, involve sequencing short fragments of this ubiquitous gene, and comparing these fragments to reference sequences in databases to identify the microbes present. Traditionally, whole 16S rRNA sequences with more than 97% sequence identity (id) are assigned to a single operational taxonomic unit (OTUs); each OTU being a …
The Establishment Of A Fibroblastic Cell Line From Yellow Perch (Perca Flavescens) And Its Potential Applications In Toxicology, Katelin W. Spiteri
The Establishment Of A Fibroblastic Cell Line From Yellow Perch (Perca Flavescens) And Its Potential Applications In Toxicology, Katelin W. Spiteri
Theses and Dissertations (Comprehensive)
This thesis describes the establishment, characterization and potential toxicological applications of YPF5, a yellow perch cell line. YPF5 is a fibroblastic cell line derived from the caudal fin of yellow perch. This cell line has been maintained for over 2 years. Cultures have been passaged over 60 times, and successfully cryopreserved and thawed. YPF5 is grown at room temperature in Leibovitz-15 (L-15) media, supplemented with 10% fetal bovine serum and 3% penicillin-streptomycin. The origin of YPF5 has been confirmed as Perca flavescens through “DNA Barcoding” and reaffirmed through Karyotyping (2n = 48) as per literature reported karyology for percidae including …