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Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Soybean

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Method Developments To Identify Loci And Selection Patterns Associated With Genotype By Environment Interactions In Soybean, Mary M. Happ Jul 2023

Method Developments To Identify Loci And Selection Patterns Associated With Genotype By Environment Interactions In Soybean, Mary M. Happ

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

For many complex traits such as grain yield, genotype by environment (GxE) interactions are a prevalent source of phenotypic variation. Exploring the capacity of different methodologies to help describe and quantify the GxE interaction landscape for grain yield is an important step in informing plant breeders what the most viable strategies for management and exploitation of GxE may be. In this endeavor, we compared the results from multiple genome wide association studies (GWAS) that used either stability estimators as a phenotype to capture GxE variance, or directly mapped GxE in a mixed model for yield. Leading into this study, a …


Genomic Selection For Yield And Seed Composition Stability In An Applied Soybean Breeding Program, Benjamin Harms May 2023

Genomic Selection For Yield And Seed Composition Stability In An Applied Soybean Breeding Program, Benjamin Harms

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Stability traits are of primary importance in plant breeding to ensure consistency in phenotype across a range of environments. However, selection efficiency and accuracy for stability traits can be hindered due to the requirement of obtaining phenotype data across multiple years and environments for proper stability analysis. Genomic selection is a method that allows prediction of a phenotype prior to observation in the field using genome-wide marker data and phenotype data from a training population. To assess prediction of stability traits, two elite-yielding soybean populations developed three years apart in the same breeding program were used. The individuals in each …


Soybean Response To Water: Trait Identification And Prediction, Shawn Jenkins Feb 2020

Soybean Response To Water: Trait Identification And Prediction, Shawn Jenkins

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The rising demand for soybean [Glycine Max (L.) Merrill] taken in consideration with current climatic trends accentuates the importance of improving soybean seed yield response per unit water (WP). To further our understanding of the quantitative WP trait, a multi-omic approach was implemented for improved trait identification and predictive modeling opportunities. Through the evaluation of two recombinant inbred line populations jointly totaling 439 lines subjected to contrasting irrigation treatments, informative agronomic, phenomic, and genomic associations were identified. Across both populations, relationships were identified between lodging at maturity (r = -0.58, H = 0.86), canopy to air temperature differential …


Understanding Nitrogen Limitation In Soybean, Nicolas Cafaro La Menza Dec 2019

Understanding Nitrogen Limitation In Soybean, Nicolas Cafaro La Menza

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Meeting soybean demand on existing cropland area for a global population of 9.7 billion people by the year 2050 requires narrowing the existing gap between average producer yield and yield potential. Soybean relies on two sources on nitrogen (N): biological N2 fixation and indigenous soil N supply. As soybean yield continues to increase, it seems critical to know if there is a yield level at which potential contribution of indigenous nitrogen sources and fixation becomes insufficient to meet crop N requirements for high yields, while still maintaining or increasing protein and oil concentration. This study evaluated N limitation across 29 …


Integration Of Cover Crops Into Midwest Corn-Soybean Cropping Systems And Potential For Weed Suppression, Joshua S. Wehrbein Dec 2019

Integration Of Cover Crops Into Midwest Corn-Soybean Cropping Systems And Potential For Weed Suppression, Joshua S. Wehrbein

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Cover crops have potential to provide benefits to agricultural systems, such as improved soil productivity, nutrient scavenging, weed suppression, and livestock forage. There are several challenges associated with cover crop integration into traditional Midwest corn-soybean cropping systems. One of these challenges is timely establishment in the fall, which is limited by the relatively late harvest of corn and soybean. Cover crop effectiveness is related to the amount of biomass produced, thus maximizing the growth period in the fall is desired. To address this challenge, we evaluated the potential to utilize early-season soybean maturity groups (MGs) to allow for earlier soybean …


Effect Of Soil-Applied Protoporphyrinogen Oxidase Inhibitor Herbicides On Soybean Seedling Disease, Nicholas J. Arneson May 2019

Effect Of Soil-Applied Protoporphyrinogen Oxidase Inhibitor Herbicides On Soybean Seedling Disease, Nicholas J. Arneson

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Seedling disease is one the most economically important diseases of soybean in the United States. It is commonly caused by Fusarium spp., Rhizoctonia solani, Pythium spp., and Phytophthora sojae, alone, or together as a disease complex. Fungicide seed treatments continue to provide the most consistent management of seedling diseases. Soil-applied protoporphyrinogen oxidase (PPO) inhibitor herbicides are used preemergence in soybean production to manage several broadleaf weeds. Applications of PPO-inhibitors can result in phytotoxic injury to soybean when environmental conditions are not favorable for soybean growth. These environmental conditions can favor seedling disease development as well. In this thesis, two …


Influence Of Multispecies Interference Of Common Ragweed (Ambrosia Artemisiifolia L.) And Common Waterhemp (Amaranthus Rudis Sauer) On Soybean [Glycine Max (L.) Merr.] Growth And Yield Under Variable Water Supply In Nebraska, Koffi Badou Jeremie Kouame May 2018

Influence Of Multispecies Interference Of Common Ragweed (Ambrosia Artemisiifolia L.) And Common Waterhemp (Amaranthus Rudis Sauer) On Soybean [Glycine Max (L.) Merr.] Growth And Yield Under Variable Water Supply In Nebraska, Koffi Badou Jeremie Kouame

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Common ragweed (Ambrosia artemisiifolia L.) and common waterhemp (Amaranthus rudis Sauer) are two problematic weeds for soybean producers in the United States. Both weeds have evolved resistance to many herbicides, including glyphosate. It is therefore essential to understand how these weeds in mixture impact soybean growth and yield and also how they deplete soil moisture in rainfed and irrigated cropping systems. The objectives of this research were to: (i) understand the influence of variable water supply on soybean yield loss in mixture with ragweed and waterhemp, (ii) quantify the influence of variable water supply on soybean growth in …


Emergence, Competition, And Management Of Glyphosate-Resistant Common Ragweed (Ambrosia Artemisiifolia L.) In Nebraska Soybean, Ethann R. Barnes Apr 2017

Emergence, Competition, And Management Of Glyphosate-Resistant Common Ragweed (Ambrosia Artemisiifolia L.) In Nebraska Soybean, Ethann R. Barnes

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Common ragweed (Ambrosia artemisiifolia L.) is a competitive annual broadleaf weed in soybean (Glycine max) production fields throughout North America. The recent confirmation of glyphosate-resistant common ragweed in Nebraska justified the need to assess the emergence pattern and competitive ability of common ragweed in soybean and to evaluate alternative herbicide programs for effective management. The objectives of this research were to: 1) evaluate the effect of tillage and develop a predictive model for the emergence pattern of common ragweed in Nebraska; 2) model the competitive interaction between soybean and common ragweed as influenced by density and irrigation …


Temperature Control Of Node Appearance And Initiation In Soybean, Fatima Amor M. Tenorio Aug 2016

Temperature Control Of Node Appearance And Initiation In Soybean, Fatima Amor M. Tenorio

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Soybean demand remains strong and continues to grow as a source of protein and oil for food and feed. Soybean production is expanding into cooler and warmer environments, thus, it becomes critical to expand the current knowledge about the influence of temperature on soybean. Temperature is the main environmental factor effecting node appearance rate (NAR) and node initiation rate (NIR), which are key parameters controlling soybean growth and development. This study aims to assess the response of NAR and NIR to temperature and investigate the coordination between these two processes under controlled and field conditions. Two greenhouse experiments with four …


Distribution Of Genomic Variation In The Usda Soybean Germplasm Collection And Relationship With Phenotypic Variation, Nonoy Batiller Bandillo Jul 2016

Distribution Of Genomic Variation In The Usda Soybean Germplasm Collection And Relationship With Phenotypic Variation, Nonoy Batiller Bandillo

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The USDA Soybean Germplasm Collection harbors a large stock of genetic diversity with potential to accelerate soybean cultivar development. The extent and nature of favorable alleles contained in the collection are not well known nor is the distribution of genetic variation and how it relates to phenotypic variation. The genotyping of the entire USDA Soybean Germplasm Collection marked the beginning of a systematic exploration of genetic diversity for genetic research and breeding. In this research, we conducted the first comprehensive analysis of population structure on the collection of ~14,400 soybean accessions [Glycine max (L.) Merr. and G. soja Siebold …


High Yield Soybean Management: Planting Practices, Nutrient Supply, And Growth Modification, Evan Sonderegger Aug 2013

High Yield Soybean Management: Planting Practices, Nutrient Supply, And Growth Modification, Evan Sonderegger

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Growers are constantly seeking ways to improve yield in soybean [Glycine max (L.) Merr.]. There has been much interest in the use of selected alternative practices to maximize soybean yield. These practices include planting soybean at higher than recommended seeding rates, planting soybean in narrow rows, breaking apical dominance to induce branching, application of strobilurin fungicides prophylactically to minimize disease and extend the seed filling period, the use of N fertilizer both in furrow and foliar applied, and the use of seed treatments to promote early stand establishment and health. Field studies were conducted at the University of Nebraska …