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- Genetic diversity (6)
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Length Accuracy Of Logs From Birch And Aspen Harvested In Thinning Operations, Mariusz Bembenek, Piotr S. Mederski, Zbigniew Karaszewski, Agnieszka Lacka, Witold Grzywinski, Andrzej Wegiel, Dieter F. Giefing, Jorn Erler
Length Accuracy Of Logs From Birch And Aspen Harvested In Thinning Operations, Mariusz Bembenek, Piotr S. Mederski, Zbigniew Karaszewski, Agnieszka Lacka, Witold Grzywinski, Andrzej Wegiel, Dieter F. Giefing, Jorn Erler
Turkish Journal of Agriculture and Forestry
No abstract provided.
Fruit Quality Parameters And Molecular Analysis Of Apple Germplasm Resourcesfrom Van Lake Basin, Turkey, Tuncay Kaya, Fi̇kri̇ Balta, Suat Şensoy
Fruit Quality Parameters And Molecular Analysis Of Apple Germplasm Resourcesfrom Van Lake Basin, Turkey, Tuncay Kaya, Fi̇kri̇ Balta, Suat Şensoy
Turkish Journal of Agriculture and Forestry
No abstract provided.
Exogenously Applied Nitric Oxide Confers Tolerance To Salinity-Induced Oxidativestress In Two Maize (Zea Mays L.) Cultivars Differing In Salinity Tolerance, Cengi̇z Kaya, Muhammad Ashraf, Osman Sönmez, Ati̇lla Levent Tuna, Sali̇h Aydemi̇r
Exogenously Applied Nitric Oxide Confers Tolerance To Salinity-Induced Oxidativestress In Two Maize (Zea Mays L.) Cultivars Differing In Salinity Tolerance, Cengi̇z Kaya, Muhammad Ashraf, Osman Sönmez, Ati̇lla Levent Tuna, Sali̇h Aydemi̇r
Turkish Journal of Agriculture and Forestry
No abstract provided.
Compatible Merchantable Stem Volume And Taper Equations For Eucalyptusplantations In The Eastern Mediterranean Region Of Turkey, Ramazan Özçeli̇k, Mehmet Fati̇h Göçeri̇
Compatible Merchantable Stem Volume And Taper Equations For Eucalyptusplantations In The Eastern Mediterranean Region Of Turkey, Ramazan Özçeli̇k, Mehmet Fati̇h Göçeri̇
Turkish Journal of Agriculture and Forestry
No abstract provided.
Study On The Expression Of Dehydrin Genes And Activities Of Antioxidativeenzymes In Floral Buds Of Two Sand Pear (Pyrus Pyrifolia Nakai) Cultivarsrequiring Different Chilling Hours For Bud Break, Sayed Hussain, Guoqin Liu, Dongfen Liu, Maqsood Ahmed, Nazim Hussain, Yuanwen Teng
Study On The Expression Of Dehydrin Genes And Activities Of Antioxidativeenzymes In Floral Buds Of Two Sand Pear (Pyrus Pyrifolia Nakai) Cultivarsrequiring Different Chilling Hours For Bud Break, Sayed Hussain, Guoqin Liu, Dongfen Liu, Maqsood Ahmed, Nazim Hussain, Yuanwen Teng
Turkish Journal of Agriculture and Forestry
No abstract provided.
Genotype × Environment Interaction And Stability Of Grain Yield And Selected Quality Traits In Winter Wheat In Central Asia, Shakhnoza Khazratkulova, Ram C. Sharma, Amir Amanov, Zokhid Ziyadullaev, Oybek Amanov, Safar Alikulov, Zafar Ziyaev, Dinara Muzafarova
Genotype × Environment Interaction And Stability Of Grain Yield And Selected Quality Traits In Winter Wheat In Central Asia, Shakhnoza Khazratkulova, Ram C. Sharma, Amir Amanov, Zokhid Ziyadullaev, Oybek Amanov, Safar Alikulov, Zafar Ziyaev, Dinara Muzafarova
Turkish Journal of Agriculture and Forestry
No abstract provided.
Reaction Of Some Rice Cultivars To The White Tip Nematode, Aphelenchoides Besseyi,Under Field Conditions In The Thrace Region Of Turkey, Adnan Tülek, İlker Kepenekci̇, Tuğba Hi̇lal Çi̇ftçi̇gi̇l, Hali̇l Sürek, Kemal Akin, Recep Kaya
Reaction Of Some Rice Cultivars To The White Tip Nematode, Aphelenchoides Besseyi,Under Field Conditions In The Thrace Region Of Turkey, Adnan Tülek, İlker Kepenekci̇, Tuğba Hi̇lal Çi̇ftçi̇gi̇l, Hali̇l Sürek, Kemal Akin, Recep Kaya
Turkish Journal of Agriculture and Forestry
No abstract provided.
Responses Of Apple Tree Cultivars To Drought: Carbohydrate Composition In The Leaves, Eszter Nemeskéri, Eszter Kovács-Nagy, József Nyéki, Éva Sárdi
Responses Of Apple Tree Cultivars To Drought: Carbohydrate Composition In The Leaves, Eszter Nemeskéri, Eszter Kovács-Nagy, József Nyéki, Éva Sárdi
Turkish Journal of Agriculture and Forestry
No abstract provided.
Construction Of Dense Genetic Linkage Maps Of Apple Cultivars Kaşel-41and Williams' Pride By Simple Sequence Repeat Markers, Elmira Ziya Motalebipour, Sali̇h Kafkas, Şeri̇f Özongun, Ayşe Ni̇lgün Atay
Construction Of Dense Genetic Linkage Maps Of Apple Cultivars Kaşel-41and Williams' Pride By Simple Sequence Repeat Markers, Elmira Ziya Motalebipour, Sali̇h Kafkas, Şeri̇f Özongun, Ayşe Ni̇lgün Atay
Turkish Journal of Agriculture and Forestry
No abstract provided.
Seasonal Variation In Amino Acid And Phenolic Compound Profiles Of Three Turkish White Wine Grapes, Mustafa Ümi̇t Ünal, Aysun Şener, Kemal Şen, Murat Yilmazteki̇n
Seasonal Variation In Amino Acid And Phenolic Compound Profiles Of Three Turkish White Wine Grapes, Mustafa Ümi̇t Ünal, Aysun Şener, Kemal Şen, Murat Yilmazteki̇n
Turkish Journal of Agriculture and Forestry
No abstract provided.
Protein Nutritional Value Of Rocket Leaves And Possibilities Of Itsmodification During Plant Growth, Renata Nurzynska-Wierdak
Protein Nutritional Value Of Rocket Leaves And Possibilities Of Itsmodification During Plant Growth, Renata Nurzynska-Wierdak
Turkish Journal of Agriculture and Forestry
No abstract provided.
Assessing The Impact Of Azadirachtin Application To Soil On Ureaseactivity And Its Kinetic Parameters, Ridvan Kizilkaya, Iraida Samofalova, Natalya Mudrykh, Fari̇z Mi̇kai̇lsoy, İzzet Akça, Svetlana Sushkova, Tatiana Minkina
Assessing The Impact Of Azadirachtin Application To Soil On Ureaseactivity And Its Kinetic Parameters, Ridvan Kizilkaya, Iraida Samofalova, Natalya Mudrykh, Fari̇z Mi̇kai̇lsoy, İzzet Akça, Svetlana Sushkova, Tatiana Minkina
Turkish Journal of Agriculture and Forestry
No abstract provided.
Growth, Yield, And Calcium And Boron Uptake Of Tomato(Lycopersicon Esculentum L.) And Cucumber (Cucumis Sativus L.) Asaffected By Calcium And Boron Humate Application In Greenhouse Conditions, Melek Eki̇nci̇, Aslihan Esri̇ngü, Ati̇lla Dursun, Ertan Yildirim, Meti̇n Turan, Mehmet Rüştü Karaman, Tuba Arjumend
Growth, Yield, And Calcium And Boron Uptake Of Tomato(Lycopersicon Esculentum L.) And Cucumber (Cucumis Sativus L.) Asaffected By Calcium And Boron Humate Application In Greenhouse Conditions, Melek Eki̇nci̇, Aslihan Esri̇ngü, Ati̇lla Dursun, Ertan Yildirim, Meti̇n Turan, Mehmet Rüştü Karaman, Tuba Arjumend
Turkish Journal of Agriculture and Forestry
The objective of this study was to examine the effect of calcium humate, boron humate, and humic acid solutions on growth, yield, quality, and calcium and boron uptake of tomato (Lycopersicon esculentum L.) and cucumber (Cucumis sativus L.), as well as changes in soil nutrient status after crop harvest. Four different concentrations (500, 1000, 3000, and 5000 mg kg-1) of calcium humate (12% CaO, 15% humic and fulvic acid), boron humate (10% BOH4, 15% humic and fulvic acid), and humic acid (15% humic and fulvic acid) were used in this research. The results revealed that Ca humate, B humate, and …
Evaluation Of Pyrosequencing For Large-Scale Identificationof Plant Species (Grasses As A Model), Nadia Haider
Evaluation Of Pyrosequencing For Large-Scale Identificationof Plant Species (Grasses As A Model), Nadia Haider
Turkish Journal of Agriculture and Forestry
Grasses (Poaceae) are among the most important and widely cultivated plants. Identification of grass species using morphological characters is a difficult task for nonspecialists, and it is not always an accurate method. DNA-based molecular markers have been widely used as an alternative towards more accurate identification of plant species. The molecular method that can be effective for large-scale identification of grass species, however, must satisfy requirements for specific amplification of DNA and reveal enough variability to distinguish species. The goal of this study was to evaluate the ability of pyrosequencing to detect SNP polymorphisms for an optimal discrimination of grass …
Method For Substitute Modulus Determination Of Furniture Frame Construction Joints, Hasan Özgür İmi̇rzi̇, Jerzy Smardzewski, Ni̇hat Döngel
Method For Substitute Modulus Determination Of Furniture Frame Construction Joints, Hasan Özgür İmi̇rzi̇, Jerzy Smardzewski, Ni̇hat Döngel
Turkish Journal of Agriculture and Forestry
The goal of the performed experiments was to determine the strength, stiffness, and modulus of the elasticity of dowel, mortise and loose-tenon, and mortise and tenon L-type furniture joints under diagonal tension and compression loads. The specimens were constructed from Turkish beech (Fagus orientalis L.), white oak (Quercus alba), and white walnut (Juglans cinerea L.) and were assembled with a water-resistant PVAC adhesive. According to the obtained results, the highest stiffness/strength values were estimated in mortise and tenon joints constructed of white oak, whereas dowel joints constructed from Turkish beech showed the lowest stiffness/strength and deformability. The elasticity modulus of …
Clonal Propagation And Synthetic Seed Production From Nodal Segments Ofcape Gooseberry (Physalis Peruviana L.), A Tropical Fruit Plant, Bahti̇yar Buhara Yücesan, Ali̇yu Mohammed, Merve Arslan, Ekrem Gürel
Clonal Propagation And Synthetic Seed Production From Nodal Segments Ofcape Gooseberry (Physalis Peruviana L.), A Tropical Fruit Plant, Bahti̇yar Buhara Yücesan, Ali̇yu Mohammed, Merve Arslan, Ekrem Gürel
Turkish Journal of Agriculture and Forestry
Physalis peruviana L. contains polyphenols and carotenoids with antiinflammatory and antioxidant activities used against diabetes. To establish an efficient regeneration system using nodal segments excised from 4-week-old germinated seedlings, direct plant regeneration, without additional rooting stage, was achieved on LS medium containing 0.5 mg/L 6-benzylaminopurine (BAP), kinetin (KIN), thidiazuron (TDZ), or gibberellic acid (GA3), alone or in combination with 0.25 mg/L indole-3-acetic acid (IAA) or indole-3-butyric acid (IBA), after 2 weeks of incubation. The highest mean numbers of shoots and well-developed roots were obtained on LS medium containing solely 0.5 mg/L TDZ, producing 5.3 shoots and 3.3 roots per explant …
Radiation, Water, And Nitrogen Use Efficiencies Of Gossypium Hirsutum L., Shakeel Ahmad, Ilyas Raza, Di̇lbaugh Muhammad, Hakoomat Ali, Sajjad Hussain, Hülya Doğan, Muhammad Ziaulhaq
Radiation, Water, And Nitrogen Use Efficiencies Of Gossypium Hirsutum L., Shakeel Ahmad, Ilyas Raza, Di̇lbaugh Muhammad, Hakoomat Ali, Sajjad Hussain, Hülya Doğan, Muhammad Ziaulhaq
Turkish Journal of Agriculture and Forestry
Resource use efficiency is a baseline for productive agriculture and proper management of different resources (water, nitrogen, light, and land), and it plays a pivotal role in the accomplishment of this goal. Three field experiments were carried out at the experimental farm area of the Central Cotton Research Institute, Multan, Pakistan, in 2009 and 2010 to investigate the effects of different resources on cotton crops. Treatments for the first experiment included 4 cultivars and 6 nitrogen levels. The second experiment comprised 3 variables, irrigation methods, cultivars, and plant spacing, whereas 2 variables, including different irrigation regimes and glycinebetaine application, were …
Evaluation Of Drought Tolerance Of Winter Bread Wheat Genotypes Underdrip Irrigation And Rain-Fed Conditions, Jamala Mursalova, Zeynal Akparov, Javid Ojaghi, Mahammad Eldarov, Savaş Belen, Nurberdi Gummadov, Alexey Morgounov
Evaluation Of Drought Tolerance Of Winter Bread Wheat Genotypes Underdrip Irrigation And Rain-Fed Conditions, Jamala Mursalova, Zeynal Akparov, Javid Ojaghi, Mahammad Eldarov, Savaş Belen, Nurberdi Gummadov, Alexey Morgounov
Turkish Journal of Agriculture and Forestry
To evaluate the genetic diversity in 48 winter bread wheat genotypes originating from different countries, an experiment based on randomized complete block design with 4 replications was carried out in drip irrigation and rain-fed conditions at the field station of the Transitional Zone Agricultural Research Institute, Eskişehir, Turkey in 2011 and 2012. Based on grain yield under rain-fed and irrigated conditions, drought tolerance indices, i.e. stress susceptibility index (SSI), stress tolerance index (STI), tolerance index (TOL), mean productivity (MP), and geometric mean productivity (GMP), were calculated to identify genotypes with better yield and drought tolerance. Analysis of variance indicated that …
Influences Of Different Iron Levels On Plant Growth And Photosynthesis Of W. Murcott Mandarin Grafted On Two Rootstocks Under High Ph Conditions, Meral İncesu, Turgut Yeşi̇loğlu, Berken Çi̇men, Bi̇lge Yilmaz
Influences Of Different Iron Levels On Plant Growth And Photosynthesis Of W. Murcott Mandarin Grafted On Two Rootstocks Under High Ph Conditions, Meral İncesu, Turgut Yeşi̇loğlu, Berken Çi̇men, Bi̇lge Yilmaz
Turkish Journal of Agriculture and Forestry
W. Murcott scion, budded onto two rootstocks, was evaluated under high pH conditions supplied with different Fe levels. Plant dry weight, leaf area, iron chlorosis symptom scale, leaf chlorophyll concentration, net photosynthetic rate, and ferric-chelate reductase (FCR) activity variables were investigated under high pH conditions. Control plants (T1) produced the most leaf area, whereas plants grown without Fe (T2) produced the least. Dry weight was highest in 'Volkameriana' T1 (control) plants and lowest in 'Swingle citrumelo' T3 (10 μM Fe and 7.8 pH) and T2 (0 μM Fe and 7.8 pH) treatments. Significant differences in SPAD and iron chlorosis scale …
Sequencing Of Plant Genomes ? A Review, Mi̇ne Türktaş, Kuaybe Yücebi̇lgi̇li̇ Kurtoğlu, Gabriel Dorado, Baohong Zhang, Pilar Hernandez, Turgay Ünver
Sequencing Of Plant Genomes ? A Review, Mi̇ne Türktaş, Kuaybe Yücebi̇lgi̇li̇ Kurtoğlu, Gabriel Dorado, Baohong Zhang, Pilar Hernandez, Turgay Ünver
Turkish Journal of Agriculture and Forestry
The scientific revolution that started with the human-genome sequencing project, carried out with first-generation sequencing technology, has initiated other sequencing projects, including those for plant species. Different technologies have been developed together with the second- and third-generation sequencing platforms called 1396984945next-generation1396986481 sequencing. This review deals with the most relevant second-generation sequencing platforms, advanced analysis tools, and sequenced plant genomes. To date, a number of plant genomes have been sequenced, with many more projected for the near future. Using the new techniques and developed advanced bioinformatics tools, several studies including both plant genomics and transcriptomics were carried out. Likewise, completion of …
Genetic Variability Of Bilaterally Symmetrical Fruits Of Norway Maple In Function Of Species Biodiversity Conservation, Isidora Simovic, Mirjana Ocokoljic, Dragica Obratov-Petkovic, Dragica Vilotic
Genetic Variability Of Bilaterally Symmetrical Fruits Of Norway Maple In Function Of Species Biodiversity Conservation, Isidora Simovic, Mirjana Ocokoljic, Dragica Obratov-Petkovic, Dragica Vilotic
Turkish Journal of Agriculture and Forestry
Parkway trees in urban environments have a pivotal ecological role, primarily because they modify microclimatological parameters. Norway maple is a suitable species for these purposes since it is very adaptable to city conditions. This characteristic of Norway maple allows urban trees to be used as a basis for biodiversity conservation. Bilaterally symmetrical fruits of Norway maple are particularly convenient for the exploration of developmental stability and the role of genetic and environment in variability of morphological characteristics of Norway maple. Variability change through different conditions could be used for creation of a scale that could serve to predict morphology of …
Physiological Characteristics, Antioxidant Enzyme Activities, And Gene Expression In 2 Spring Canola (Brassica Napus L.) Cultivars Under Drought Stress Conditions, Seyed Mohammad Hosseini, Tahereh Hasanloo, Saeed Mohammadi
Physiological Characteristics, Antioxidant Enzyme Activities, And Gene Expression In 2 Spring Canola (Brassica Napus L.) Cultivars Under Drought Stress Conditions, Seyed Mohammad Hosseini, Tahereh Hasanloo, Saeed Mohammadi
Turkish Journal of Agriculture and Forestry
This study examined the influence of drought stress during the flowering stage of 2 canola cultivars on some physiological characteristics, antioxidant activities, and gene expression of antioxidant enzymes. Significant differences were observed among interactions of cultivars and levels of drought stress in total shoot dry material, relative water content percentage, proline, carbohydrates, gene expression, and activities of antioxidant enzymes. Moreover, a significant positive correlation was indicated between shoot dry materials with relative water content percentage, sucrose, catalase activity, ascorbate peroxidase activity, and cytosolic ascorbate peroxidase relative gene expression ratio. Antioxidant enzymatic activity and the association between gene transcript levels and …
Molecular Cloning Of Bnzep And Its Expression In Petals Of Different Colors Inbrassica Napus L., Jun Jiang, Lushen Tian, Shixing Guo, Qingqing Yu, Dezhi Zeng, Yingze Niu
Molecular Cloning Of Bnzep And Its Expression In Petals Of Different Colors Inbrassica Napus L., Jun Jiang, Lushen Tian, Shixing Guo, Qingqing Yu, Dezhi Zeng, Yingze Niu
Turkish Journal of Agriculture and Forestry
C?????arotenoids are a class of pigment elements present in photosynthetic organisms. T??he transcripts of specific carotenoid biosynthetic genes are probably important for the formation of different colors of flower petals. Zeaxanthin epoxidase (ZEP) enzyme activity is important for the high content of carotenoids in petals. In the present study, the zeaxanthin epoxidase gene in Brassica napus L. (BnZEP) was cloned and bioinformatically analyzed. The expression levels of the BnZEP gene in different plant organs and petals of different colors were investigated and compared in B. Napus. The results showed that the full-length cDNA sequence of BnZEP was 2228 bp, containing …
Genetic Diversity And Chemical Characterization Of Selected Polish And Russian Cultivars And Clones Of Blue Honeysuckle (Lonicera Caerulea), Elzbieta Kaczmarska, Jacek Gawronski, Magdalena Dyduch-Sieminska, Agnieszka Najda, Wojciech Marecki, Jadwiga Zebrowska
Genetic Diversity And Chemical Characterization Of Selected Polish And Russian Cultivars And Clones Of Blue Honeysuckle (Lonicera Caerulea), Elzbieta Kaczmarska, Jacek Gawronski, Magdalena Dyduch-Sieminska, Agnieszka Najda, Wojciech Marecki, Jadwiga Zebrowska
Turkish Journal of Agriculture and Forestry
In traditional medicine, Lonicera caerulea has a notable place, and it has been used for thousands of years in East Asian countries for treating cancer, inflammation, hepatic complications, influenza, and wounds. However, the molecular and chemical characterization of this plant is not well defined. In this study, inter-simple sequence repeat (ISSR) markers were used to determine the genetic variability of 7 blue honeysuckle cultivars and 3 clones. To characterize these 10 accessions, total flavonoids, phenolic acids contents, and antioxidant activities were estimated. Twelve primers generated 101 polymorphic ISSR-polymerase chain reaction bands. Based on the ISSR amplification profiles, a cluster dendrogram …
Partial Characterization And Development Of Sensitive And Reliablediagnostic For The Detection Of Cucumber Mosaic Virus, Shahanavaj Khan
Partial Characterization And Development Of Sensitive And Reliablediagnostic For The Detection Of Cucumber Mosaic Virus, Shahanavaj Khan
Turkish Journal of Agriculture and Forestry
A survey on Cucumber mosaic virus (CMV) was conducted on 21 banana orchards in three bananas producing states: Karnataka, Maharashtra, and Uttar Pradesh. Sampling was done during winter and autumn and all samples were initially examined for the presence of CMV using DAS-ELISA. Out of 300 tested samples, the presence of CMV was observed in 13. The lowest rate of infection was determined in Uttar Pradesh followed by Maharashtra, while high infections were observed in samples from Karnataka. Three CMV infected samples represented in each state were amplified through RT-PCR using the movement protein (MP) gene specific primers and cloned …
Generation Of Transgenic Sugar Beet (Beta Vulgarism L.) Overexpressing The Polygalacturonase Inhibiting Protein 1 Of Phaseolus Vulgaris (Pvpgip1) Through Agrobacterium-Mediated Transformation, Reza Mohammadzadeh, Mostafa Motallebi, Mohamadreza Zamani, Zahra Moghaddassi Jahromi, Peyman Norouzi, Manuel Benedetti, Giulia De Lorenzo
Generation Of Transgenic Sugar Beet (Beta Vulgarism L.) Overexpressing The Polygalacturonase Inhibiting Protein 1 Of Phaseolus Vulgaris (Pvpgip1) Through Agrobacterium-Mediated Transformation, Reza Mohammadzadeh, Mostafa Motallebi, Mohamadreza Zamani, Zahra Moghaddassi Jahromi, Peyman Norouzi, Manuel Benedetti, Giulia De Lorenzo
Turkish Journal of Agriculture and Forestry
Numerous diseases caused by fungal pathogens influence the annual production of sugar beet. In order to obtain a plant resistant to fungi, genetic transformation has been applied to the sugar beet. To invade a plant tissue, phytopathogenic fungi produce several cell wall-degrading enzymes (CWDEs); polygalacturonases (PGs) are pathogenicity factors produced at the earlier stages of a fungal infection that depolymerize the homogalacturonan. One of the strategies used by plants to limit the degradation of the cell wall polysaccharides by fungal CWDEs is the production of proteinaceous inhibitors. Against fungal, microbial, and insect PGs, plants produce cell wall-associated polygalacturonase-inhibiting proteins (PGIPs). …
Genetic Variability, Heritability, And Genetic Advance In Strawberry(Fragaria × Ananassa Duch.), Pranav Kumar Mishra, Ram Badan Ram, Neeraj Kumar
Genetic Variability, Heritability, And Genetic Advance In Strawberry(Fragaria × Ananassa Duch.), Pranav Kumar Mishra, Ram Badan Ram, Neeraj Kumar
Turkish Journal of Agriculture and Forestry
Strawberry (Fragaria × ananassa Duch.) genotypes were evaluated to study genetic variation and the relationship between yield and its component using a randomized complete block design during 2013/14. The results showed significant variance among genotypes of all traits. The phenotypic coefficient of variation (PCV) for all the characters was slightly higher than genotypic coefficient of variation (GCV), which signified the presence of environmental influence to some degree in the phenotypic expression of characters. Dry fruit weight had the highest PCV (52.47) and GCV (48.26). The estimates of narrow sense heritability (h2) were observed to be lower than those of broad …
Transcriptome Characterization And Large-Scale Identification Of Ssr/Snpmarkers In Symbiotic Nitrogen Fixation Crop Faba Bean (Vicia Faba L.), Sundan Suresh, Tae-Sung Kim, Sebastin Raveendar, Joon-Hyeong Cho, Jung Yoon Yi, Myung Chul Lee, Sok-Young Lee, Hyung-Jin Baek, Gyu-Taek Cho, Jong Wook Chung
Transcriptome Characterization And Large-Scale Identification Of Ssr/Snpmarkers In Symbiotic Nitrogen Fixation Crop Faba Bean (Vicia Faba L.), Sundan Suresh, Tae-Sung Kim, Sebastin Raveendar, Joon-Hyeong Cho, Jung Yoon Yi, Myung Chul Lee, Sok-Young Lee, Hyung-Jin Baek, Gyu-Taek Cho, Jong Wook Chung
Turkish Journal of Agriculture and Forestry
We used 454 sequencing technology for faba bean transcriptome, which yielded 29.61 Mb sequence data. A total of 81,333 raw sequence reads were obtained and assembled by de novo sequence assembly. The contig distributions in three nonmutually exclusive gene ontology classifications and clusters of orthologous gene classes were assigned, which were also used to identify genes related to nitrogen fixation. Furthermore, a set of 1729 reads with simple sequence repeat (SSR) motifs were identified. Subsets of 55 SSR primer pairs were selected to validate SSR marker assay. Fifty-five primer pairs were used to amplify from one or more of the …
Identification And Functional Annotation Of Expressed Sequencetags Based Ssr Markers Of Stevia Rebaudiana, Rajinder Kaur, Neha Sharma, Ravinder Raina
Identification And Functional Annotation Of Expressed Sequencetags Based Ssr Markers Of Stevia Rebaudiana, Rajinder Kaur, Neha Sharma, Ravinder Raina
Turkish Journal of Agriculture and Forestry
Stevia rebaudiana Bertoni, a perennial herb belonging to the family Asteraceae, is a tropical as well as subtropical plant of medicinal importance. Despite being an important medicinal plant and in fact proving a boon to diabetics, it has remained almost ignored by molecular biologists. A systematic molecular evaluation of stevia germplasm and molecular breeding work are sparsely reported mainly due to the limited specific molecular markers available. Expressed sequence tags (ESTs) are a valuable resource for developing simple sequence repeats (SSRs). In this study, 5548 stevia ESTs sequences from leaf tissues were retrieved from the NCBI database. Clustering and assembly …
Single Nucleotide Polymorphism Discovery Through Illumina-Based Transcriptome Sequencing And Mapping In Lentil, Hülya Yilmaz Temel, Deni̇z Göl, Hi̇lal Betül Kaya Akkale, Abdullah Kahri̇man, Muhammed Bahatti̇n Tanyolaç
Single Nucleotide Polymorphism Discovery Through Illumina-Based Transcriptome Sequencing And Mapping In Lentil, Hülya Yilmaz Temel, Deni̇z Göl, Hi̇lal Betül Kaya Akkale, Abdullah Kahri̇man, Muhammed Bahatti̇n Tanyolaç
Turkish Journal of Agriculture and Forestry
Lentil, which belongs to the family Leguminosae (Fabaceae), is a diploid (2n = 2x = 14 chromosomes) self-pollinating crop with a genome size of 4063 Mbp. Because of its nutritional importance and role in the fixation of nitrogen from the atmosphere, lentil is a widely used crop species in molecular genetic studies. By using DNA markers, to date, a limited number of polymorphic bands have been generated. Therefore, it is necessary to develop additional markers to saturate the genome at high density. Single nucleotide polymorphism (SNP) markers are promising for this purpose because of their abundance, stability, and heredity; they …