Digital Commons Network^™

Soybean Genetics, Genomics, And Breeding For Improving Nutritional Value And Reducing Antinutritional Traits In Food And Feed, William M. Singer, Yi-Chen Lee, Zachary Shea, Caio Canella Vieira, Dongho Lee, Xiaoying Li, Mia Cunicelli, Shaila S. Kadam, Mohammad Amir Waseem Khan, Grover Shannon, M. A. Rouf Mian, Henry T. Nguyen, Bo Zhang

Agriculture Faculty Publications

Soybean [Glycine max(L.) Merr.] is a globally important crop due to its valuable seed composition, versatile feed, food, and industrial end-uses, and consistent genetic gain. Successful genetic gain in soybean has led to widespread adaptation and increased value for producers, processors, and consumers. Specific focus on the nutritional quality of soybean seed composition for food and feed has further elucidated genetic knowledge and bolstered breeding progress. Seed components are historical and current targets for soybean breeders seeking to improve nutritional quality of soybean. This article reviews genetic and genomic foundations for improvement of nutritionally important traits, such as protein and …

Climate And Agronomy, Not Genetics, Underpin Recent Maize Yield Gains In Favorable Environments, Gonzalo Rizzo, Juan Pablo Monzon, Fatima Amor Tenorio, Réka Howard, Kenneth G. Cassman, Patricio Grassini

Department of Agronomy and Horticulture: Faculty Publications

Quantitative understanding of factors driving yield increases of major food crops is essential for effective prioritization of research and development. Yet previous estimates had limitations in distinguishing among contributing factors such as changing climate and new agronomic and genetic technologies. Here, we distinguished the separate contribution of these factors to yield advance using an extensive database collected from the largest irrigated maize-production domain in the world located in Nebraska (United States) during the 2005-to-2018 period. We found that 48% of the yield gain was associated with a decadal climate trend, 39% with agronomic improvements, and, by difference, only 13% with …

What Can We Do? Puzzling Over The Interpretation Of Heredity And Variation From Galton To Genetic Engineering, Peter J. Taylor

Working Papers on Science in a Changing World

First six chapters of a book motivated as follows: When I had mentioned to colleagues that I was exploring some significant issues overlooked by both sides in nature-nurture debates, the typical response was “we know, of course, that nature and nurture are intertwined”; they never asked “which nature-nurture science are you referring to?” It occurred to me that, in the long history of nature-nurture debates, opposing sides had always assumed or implied that these different scientific approaches were speaking to the same issues. If that were the case, then the challenge—something I was already puzzling over—was how best to draw …

Confirming World-Wide Distribution Of An Agriculturally Important Lacewing, Chrysoperla Zastrowi Sillemi, Using Songs, Morphology, Mitochondrial Gene Sequencing, And Phylogenetic Reconstruction, Zoe Mandese

Honors Scholar Theses

The Chrysoperla carnea-group of green lacewings is a cryptic species complex. Species within the group are morphologically similar, yet isolated from one another via reproductive mating song. Chrysoperla zastrowi, a species within the carnea-group, is currently described with a distribution ranging from South Africa to the Middle East and India. However, recent collections of carnea-group lacewings from Guatemala and California were preliminarily identified as Chrysoperla zastrowi based upon similarities in their vibrational courtship songs. This analysis aims to place six specimens, collected by collaborators in Guatemala, Armenia, Iran, and California, into a pre-existing phylogeny of the …

Utilizing Random Regression Models For Genomic Prediction Of A Longitudinal Trait Derived From High‐Throughput Phenotyping, Malachy T. Campbell, Harkamal Walia, Gota Morota

Department of Agronomy and Horticulture: Faculty Publications

The accessibility of high‐throughput phenotyping platforms in both the greenhouse and field, as well as the relatively low cost of unmanned aerial vehicles, has provided researchers with an effective means to characterize large populations throughout the growing season. These longitudinal phenotypes can provide important insight into plant development and responses to the environment. Despite the growing use of these new phenotyping approaches in plant breeding, the use of genomic prediction models for longitudinal phenotypes is limited in major crop species. The objective of this study was to demonstrate the utility of random regression (RR) models using Legendre polynomials for genomic …

Genetic Diversity And Distinctness Of Wild Nebraska Hops And Hop Cultivars (Humulus Lupulus L.), Megan Franklin

Honors Theses

Background Commercial hop (Humulus lupulus) cultivars that are being grown in the Midwest are not performing as successfully as when they are grown in the Pacific Northwest, the region to which they are adapted. To increase adaptation to the Midwest environment, one strategy is to draw from the genetic pool of wild native Midwest hops, which have developed genes that allow them to grow successfully in this environment. Wild hop plants that are genetically distinct from commercial cultivars are likely to have more adaptations, such as pest/disease resistance and drought tolerance, which can be bred into commercial lines. The …

Sheep Updates 2014, James Kynge, David Lindsay, Johan Greeff, John Young, Luke Stephen, Graham Gardner, Stephen Lee, Bindi Murray, James Rowe

Sheep Updates

This session covers nine papers from different authors:

Genetic Research: A brave new world of opportunities

1. "China's Appetite" - The implications for WA, James Kynge, Chairman, FT Confidential Research, Emerging Markets Editor, Financial Times, London.

2. The genetics warm-up - the secret language of genetic research and its impacts on WA's sheep flock, Professor David Lindsay, University of Western Australia, Perth WA

The strength of genetic data: is it really valuable?

3. Genetic research in Western Australia - What have the compromises in production been? Johan Greeff, Senior Geneticist, Department of Agriculture and Food Western Australia

4. Show …

Origins Of The Classical Gene Concept, 1900–1950: Genetics, Mechanistic, Philosophy, And The Capitalization Of Agriculture, Garland E. Allen

Biology Faculty Publications & Presentations

In the period of “classical genetics” (roughly 1915–1950), the common view of the gene was mechanistic—that is, genes were seen as individual, atomistic units, as material components of the chromosomes. Although it was recognized early on that genes could interact and influence each other’s expression, they were still regarded as individually functioning units, much like the chemists’ atoms or molecules. Although geneticists in particular knew the story was more complex, the atomistic gene remained the central view for a variety of reasons. It fit the growing philosophy of mechanistic materialism in the life sciences, as biologists tried to make their …

2012 Wild Blueberry Project Reports, Dorothy J. Klimis-Zacas, Vivian Ch Wu, Frank A. Drummond, Judith A. Collins, Lee Beers, Eric Asare, Alex Bacjz, Kalyn Bickerman, Sara Bushmann, Shannon Chapin, Cyndy Loftin, Alison Dibble, Lois Berg Stack, Eric Venturini, Samuel Hanes, Aaron Hoshide, Matthew S. Jones, Brianne Looze, Seanna L. Annis, Caleb Slemmons, David E. Yarborough, Jennifer L. D'Appollonio, Tsutomu Ohno, Ellen Mallory, Hannah Griffin, Katie Mcphee

Wild Blueberry Research Reports

The 2012 edition of the Wild Blueberry Project Reports was prepared for the Wild Blueberry Commission of Maine and the Wild Blueberry Advisory Committee by researchers at the University of Maine, Orono. Projects in this report include:

1. Do wild blueberries alleviate risk factors related to the Metabolic Syndrome?

2. Development of effective intervention measures to maintain and improve food safety for wild blueberries

3. Control tactics for blueberry pest insects, 2012

4. Development and implementation of a wild blueberry thrips IPM program, 2012

5. IPM

6. Biology of blueberry and pest insects, 2012

7. Biology of beneficial insects and …

Investing In Genetics, Bridger Feuz, Dillon M. Feuz

All Current Publications

Agriculture Extension professionals as well as other agriculture industry professionals often extol the virtues of being the” low cost producer.” In most cases being the low cost producer does lead to an increase in profitability. However, two different data sets have suggested a couple of areas that high profit producers actually spend more money on then low profit producers.

Sheep Updates 2008 - Part 3, L. J. E. Karlsson, J. C. Greeff, L. Slocombe, K. Jones, N. Underwood, Fred Wilkinson, W. D. Hoffman, W. A. Mckiernan, V. H. Oddy, M. J. Mcphee, B. L. Mcintyre, P. F. Parnell, R. A. Clark, J. Timms, G. Griffith, C. Mulholland, P. Hyland, Danielle England, Fiona Jones, John Lucey, Martin Staines, Richard Morris, Megan Abrahams, Caroline Peek, Dennis Van Gool, Daniel Gardiner, Kari-Lee Falconer, Sandra Prosser, Mario D'Antuono, John Young, Andrew Thompson, Chris Oldham, Brown Besier, Angus Campbell, Ralph Behrendt

Sheep Updates

This session covers fiveteen papers from different authors:

CONTROLLING FLY STRIKE

1. Breeding for Blowfly Resistance - Indicatoe Traits, LJE Karlsson, JC Greeff, L Slocombe, Department of Agriculture & Food, Western Australia

2.A practical method to select for breech strike resistance in non-pedigreed Merino flocks, LJE Karlsson, JC Greeff, L Slocombe, K. Jones, N. Underwood, Department of Agriculture & Food, Western Australia

3. Twice a year shearing - no mulesing, Fred Wilkinson, Producer, Brookton WA

BEEF

4. Commercial testing of a new tool for prediction of fatness in beef cattle, WD Hoffman^A, WA McKiernan^A, VH Oddy …

2008 Nebraska Beef Cattle Report Summaries, Richard J. Rasby, Galen E. Erickson, Dennis R. Brink

University of Nebraska-Lincoln Extension: Historical Materials

Reports on recent beef research are briefly summarized in this publication. Summaries of the research featured in the 2008 Beef Report appear here. Topics include cow-calf, growing, finishing and beef products.

Sheep Updates 2007 - Part 2, Ian Mcfarland, Catherine Stockman, Anne Barnes, David Pethick, Jenny Davis, Brett Thompson, Ron Leng, Sally Pieruzzini, Elizabeth Jackson, Mohammed Quaddus, Nazrul Islam, John Stanton, Melanie Dowling

Sheep Updates

This session covers six papers from different authors:

CONCURRENT SESSIONS

FINISHING LAMB AND BEEF

1. Precision Feedlot Lamb, Ian McFarland, Department of Agriculture and Food, Western Australia

2. Feeding sheep under high heat load did not decrease intake of feedlot rations, Catherine Stockman, Department of Agriculture and Food, Western Australia & Murdoch University, Anne Barnes, Murdoch University David Pethick, Murdoch University

3. Taking the stress out of fifishing lambs and cattle - EasyFeed solutions, Jenny Davis, Brett Thomson, Milne AgriGroup, Welshpool WA, Ron Leng, Emeritus Professor, University of New England, Armidale, NSW

WOOL

4. DAFWA …

2006 Lowbush Blueberry Project Reports, Kristi Crowe, Alfred A. Bushway, Rodney J. Bushway, Vivian Ch Wu, Brian Perkins, Pam Small, Darrell Donahue, Frank Drummond, Judith Collins, Floyd Dowell, Dorothy J. Klimis-Zacas, Mary Ellen Camire, Gordon Starr, David E. Yarborough, S Hoffmann, Daniel J. Bell, Seanna L. Annis, Tamara Levitsky, Loretta Kreider, Kristen Mcgovern, K Frost, John M. Smagula, Qian Wang, Kerry Fl Guiseppe

Wild Blueberry Research Reports

The 2006 edition of the Lowbush Blueberry Project Reports was prepared for the Wild Blueberry Commission of Maine and the Wild Blueberry Advisory Committee by researchers at the University of Maine, Orono. Projects in this report include:

1. Evaluation of Emerging Disinfection Technologies for Wild Blueberry Processing

2. Incorporation of wild blueberry puree into a soy-based burger and its effect on sensory and chemical properties of the broiled burgers

3. Infestation Detection using NIRS

4. Mechanism of Action through which Wild Blueberries affect Arterial Functional Properties in Normotensive and Spontaneously Hypertensive Rats

5. Practical Microbial Control Approach for Wild Blueberries …

2006 Nebraska Swine Report, Duane E. Reese

University of Nebraska-Lincoln Extension: Historical Materials

This publication was prepared by the staff in Animal Science and cooperating Departments for use in Extension, Teaching and Research programs. It deals with the results that were done in reproduction, breeding, health, nutrition, genetics, economics and housing of swine.

Sheep Updates 2005 - Part 5, Geoff Duddy, Brent Mcloud, John Sullivan, T. J. Mahar, A. Balasingam, J. H. Stanton, K. M. S. Curtis, P. R. Lamb, Eliza Dowling, Ned Crossley, Surrender Mann, Lucy Anderton, Matthew Kelly, Andrew Swan, Ian Mcfarland, Di Evans, K. Bell, D. Sackett, Robin Jacob

Sheep Updates

This session covers eleven papers from different authors; MARKET INFORMATION 1. Crystal Spring - Crystal clear and consistant, Geoff Duddy, Livestock Officer (Sheep & Wool) Yanco, NSW, Brent McLoud, (Product Development Officer) Cowra, NSW, John Sullivan, J.J Dresser and Co (Agent), Woodstock, NSW 2. An overview of Recent Developments in Dark and Medullated Fibre Testing, T.J. Mahar, A. Balasingam, AWTA Ltd 3. Opportunities and Implications for Wool Producers of the TEAM3 Prediction Equations, J.H. Stanton12 K.M.S. Curtis1 , 1Department of Agriculture Western Australia, 2 Curtin University, WA 4. Premiums and Discounts for Fibre Properties in Superfine Wool, Now and in …

2005 Nebraska Swine Report, Duane E. Reese

University of Nebraska-Lincoln Extension: Historical Materials

This publication was prepared by the staff in Animal Science and cooperating Departments for use in Extension, Teaching and Research programs. It deals with the results that were done in reproduction, breeding, health, genetics, nutrition, economics and housing of swine.

2004 Nebraska Swine Report, Duane E. Reese

University of Nebraska-Lincoln Extension: Historical Materials

This publications was prepared by the staff in Animal Science and cooperating Departments for use in Extension, Teaching and Research programs. It deals with the results that were done in reproduction, breeding, health, genetics, nutrition, economics and housing of swine.

Sheep Updates 2003 - Plenaries, Ashley Mercy, David Scobie, Neil Buchanan, Kevin Bell, John Milton, Graeme Martin, Bob Hall, Maurie Stephen, Rob Woodgate

Sheep Updates

This session covers eight papers from different authors:1. Biosecurity in the sheep industry will improve production and profits Ashley Mercy, Department of Agriculture, Western Australia 2. Easy care sheep David Scobie, AgResearch, PO Box 60 Lincoln, 8152, New Zealand 3. Targeting the market’s requirements - live sheep exports Neil Buchanan, Manager Animal Health Operations, Primary Industries & Resources, South Australia 4. Setting flock breeding objectives Kevin Bell, Sheep Management and Production Consultants, Kojonup WA 5. Future feeding of sheep in Western Australia John Milton and Graeme Martin, The University of Western Australia 6. Recipe for getting back into Sheep Bob …

2003 Nebraska Swine Report, Duane E. Reese

University of Nebraska-Lincoln Extension: Historical Materials

This publication was prepared by the staff in Animal Science and cooperating Departments for use in Extension, Teaching and Research programs. It deals with the results that were done in reproduction, breeding, health, genetics, nutrition, economics and housing of swine.

2002 Nebraska Swine Report, Duane E. Reese

University of Nebraska-Lincoln Extension: Historical Materials

This publication was prepared by the staff in Animal Science and cooperating Departments for use in Extension, Teaching and Research programs. It deals with the results that were done in reproduction, breeding, health, nutrition, economics and housing of swine.

2001 Nebraska Swine Report, Duane E. Reese

University of Nebraska-Lincoln Extension: Historical Materials

This publication was prepared by the staff in Animal Science and cooperating Departments for use in Extension, Teaching and Research programs. It deals with the results that were done in reproduction, breeding, health, nutrition, economics and housing of swine.

2000 Nebraska Swine Report, Rodger K. Johnson

University of Nebraska-Lincoln Extension: Historical Materials

This publication was prepared by the staff in Animal Science and cooperating Departments for use in Extension, Teaching and Research programs. It deals with the results that were done in reproduction, breeding, health, nutrition, economics and housing of swine.

1999 Nebraska Swine Report, Duane E. Reese

University of Nebraska-Lincoln Extension: Historical Materials

This publication was prepared by the staff in Animal Science and cooperating Departments for use in Extension, Teaching and Research programs. It deals with the results that were done in reproduction, genetics, breeding, health, nutrition, economics and housing of swine.

G95-1271 Mastitis Is A Disease -- Control Is An Everyday Task, Gerald R. Bodman, Duane N. Rice

University of Nebraska-Lincoln Extension: Historical Materials

A comprehensive mastitis control program will effectively control infections caused by both environmental and contagious pathogens.

Herd mastitis problems can be caused by both environmental and contagious pathogens (disease-causing organisms). These problems may occur separately or simultaneously. Various testing techniques are necessary to determine the type of causative organism and the infection level of the herd or individual cow. Appropriate tests include the CMT (California Mastitis Test), milk market somatic cell count (SCC), Dairy Herd Improvement Association (DHIA) SCC and laboratory cultures of milk from infected cows. Depending upon test results, mastitis control strategies may need to be changed to …

G94-1197 The Genetics And Management Of Sound Feet And Legs, Jeffrey F. Keown

University of Nebraska-Lincoln Extension: Historical Materials

Sound management of feet and legs in dairy animals affects performance. This guide offers suggestions for good management practices.

Two major parameters affect the selection process for any trait: the heritability of the trait as well as the variation associated with the trait.

Mp92-64 The Stable Fly: A Pest Of Humans And Domestic Animals, Gustave D. Thomas, Steven R. Skoda

University of Nebraska-Lincoln Extension: Historical Materials

Many species of flies are pests. Many people, if you were to ask them about flies, would be at least vaguely aware of the potential to flies to transmit disease organisms. But yet, for the most part, a fly is a fly is a fly. Sayings like "It must be about to rain, the house flies are biting" are still common and show a general need for more, readily accessible information, particularly about some of the pest flies.

Stable flies, obligate blood-feeders, are very important pests to the cattle industry and, at times, are pests to other groups (they're most …

G89-989 How To Interpret The New Animal Model For Dairy Sire Evaluation, Jeffrey F. Keown

University of Nebraska-Lincoln Extension: Historical Materials

In question and answer format this NebGuide addresses changes in genetic evaluations of both dairy cows and sores.

Why is the United States Department of Agriculture (USDA) changing the dairy sire and cow evaluation system?

The answer is simple. The Animal Model for genetic evaluations is more accurate than the old Modified Contemporary Comparison Method (M.C.C.). Previously the major limiting factors to implementing the Animal Model were computing costs and memory requirements. With the advent of new Super Computers, the computations are feasible on a national scale.

What is the Animal Model?

The Animal Model simultaneously evaluates cows and sires …

G85-755 How To Set Goals For Your Breeding Program, Jeffrey F. Keown

University of Nebraska-Lincoln Extension: Historical Materials

This NebGuide describes how to determine which trait(s) to select for, and how multiple trait selection affects genetic progress.

Dairy producers are often concerned with placing emphasis on different production traits in their breeding program. Selecting on only economically important traits should be the objective of every producer. The use of artificial insemination (A.I.) sires is the most economical and productive way to increase the genetic potential of the herd.

A cow's record is a measure of her genetic potential, which is modified by the environment in which she is kept. Environmental factors that directly influence a cow's record include …

G79-477 Beef Herd Management Calendar, Paul Q. Guyer

University of Nebraska-Lincoln Extension: Historical Materials

This publication contains a brief outline of management practices to be followed at various stages of the cow's reproductive cycle or at various times of the year.

Good management is the key to a successful beef production program. A high capital requirement and a relatively low return emphasize the need for effective management to maximize the profit potential of beef cows.